RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 FAM151BQ6UXP7 276 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 ARHGEF18Q6ZSZ5 1173 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 SLC9B2Q86UD5 537 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF547Q8IVP9 402 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 KLHDC8BQ8IXV7 354 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 CCDC112Q8NEF3 446 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 ZNF398Q8TD17 642 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 KCNE4Q8WWG9 221 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 LRRC45Q96CN5 670 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 CCDC97Q96F63 343 aaPredicted RBP11.03□□□□□ -0.64
CKS1B-206ENST00000474215 CRELD1Q96HD1 420 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 SLC38A3Q99624 504 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 DPYSL5Q9BPU6 564 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 TIMM29Q9BSF4 260 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 OSGEPL1Q9H4B0 414 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 STN1Q9H668 368 aaKnown RBP11.03□□□□□ -0.64
CKS1B-206ENST00000474215 ARNT2Q9HBZ2 717 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 LOXL2Q9Y4K0 774 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 PCDHGA7Q9Y5G6 932 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 ARL5AQ9Y689 179 aa11.03□□□□□ -0.64
CKS1B-206ENST00000474215 LAMA5O15230 3695 aa11.02□□□□□ -0.64
CKS1B-206ENST00000474215 ADAMTS20P59510 1910 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 PRR19A6NJB7 356 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 AGRPO00253 132 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 GAPDHSO14556 408 aaPredicted RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 NVLO15381 856 aaKnown RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 KLK10O43240 276 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 CRTAMO95727 393 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 HGFP14210 728 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 VCLP18206 1134 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 XRCC1P18887 633 aaPredicted RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 IDSP22304 550 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 SLC5A2P31639 672 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 STIP1P31948 543 aaKnown RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 LIMK2P53671 638 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 PDE1BQ01064 536 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 CFHR1Q03591 330 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 NFATC2Q13469 925 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 GTF2H3Q13889 308 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 SPARCL1Q14515 664 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 C16orf72Q14CZ0 275 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 PLA2G4EQ3MJ16 856 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 BROXQ5VW32 411 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 ABRAXAS1Q6UWZ7 409 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 C11orf96Q7Z7L8 435 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 ZNF761Q86XN6 746 aaPredicted RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 LRRC8AQ8IWT6 810 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 RASGEF1AQ8N9B8 481 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 AVL9Q8NBF6 648 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 DDHD1Q8NEL9 900 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 OR4K2Q8NGD2 314 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 OR4D9Q8NGE8 314 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 OR10G6Q8NH81 332 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 AHCYL2Q96HN2 611 aaKnown RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 TBL1YQ9BQ87 522 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 TMEM121Q9BTD3 319 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 ZCCHC2Q9C0B9 1178 aaKnown RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 PRORYQ9H606 182 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 AKAP7Q9P0M2 348 aaPredicted RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 CPNE7Q9UBL6 633 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 PISDQ9UG56 409 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 FEZ2Q9UHY8 353 aaPredicted RBP11.02□□□□□ -0.65
CKS1B-206ENST00000474215 DNAJC16Q9Y2G8 782 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 KCTD3Q9Y597 815 aa11.02□□□□□ -0.65
CKS1B-206ENST00000474215 ZFYVE26Q68DK2 2539 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 ARHGEF17Q96PE2 2063 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 HGSO14964 777 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 GPR39O43194 453 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 PSMD3O43242 534 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 KCNJ13O60928 360 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 POP7O75817 140 aaKnown RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 PRAMEF1O95521 474 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 METTL18O95568 372 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 CCDC175P0C221 793 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 ITIH1P19827 911 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 CSF2RBP32927 897 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 CA5AP35218 305 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 PPM1FP49593 454 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 UCNP55089 124 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 TRA2AQ13595 282 aaKnown RBP eCLIP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 RPS6KA1Q15418 735 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 GPRC6AQ5T6X5 926 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 SEL1L2Q5TEA6 688 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 AGAP9Q5VTM2 703 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 KCTD11Q693B1 232 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 TMEM71Q6P5X7 295 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 WDR74Q6RFH5 385 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 WASH2PQ6VEQ5 465 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 ZNF662Q6ZS27 426 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 SLC13A5Q86YT5 568 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 JAMLQ86YT9 394 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 TRAPPC5Q8IUR0 188 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 RCBTB1Q8NDN9 531 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 ATG4AQ8WYN0 398 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 CCDC74BQ96LY2 380 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 C19orf43Q9BQ61 176 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 FRMD8P1Q9BZ68 369 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms