RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 WASH2PQ6VEQ5 465 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 RANBP10Q6VN20 620 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 DDHD1Q8NEL9 900 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 PATE1Q8WXA2 126 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 ULK4Q96C45 1275 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 TBL1YQ9BQ87 522 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 LRRC40Q9H9A6 602 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 RDH14Q9HBH5 336 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 WASH6PQ9NQA3 447 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 POT1Q9NUX5 634 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 PLEKHM1Q9Y4G2 1056 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 ST14Q9Y5Y6 855 aa20.2■□□□□ 0.82
SNX13-206ENST00000474067 ZFC3H1O60293 1989 aaKnown RBP20.2■□□□□ 0.82
SNX13-206ENST00000474067 ANKRD11Q6UB99 2663 aaPredicted RBP20.2■□□□□ 0.82
SNX13-206ENST00000474067 LILRA5A6NI73 299 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 ERI2A8K979 691 aaKnown RBP20.19■□□□□ 0.82
SNX13-206ENST00000474067 CFAP99D6REC4 459 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 F5H423 210 aaPredicted RBP20.19■□□□□ 0.82
SNX13-206ENST00000474067 AURKAO14965 403 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 MSH3P20585 1137 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 AKT1P31749 480 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 LAMB3Q13751 1172 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 CRTC3Q6UUV7 619 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 FAM151BQ6UXP7 276 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 USP53Q70EK8 1073 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 LINC00523Q86TU6 105 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 PLXDC1Q8IUK5 500 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 BEND7Q8N7W2 519 aaPredicted RBP20.19■□□□□ 0.82
SNX13-206ENST00000474067 LSM14AQ8ND56 463 aaKnown RBP20.19■□□□□ 0.82
SNX13-206ENST00000474067 NAF1Q96HR8 494 aaKnown RBP20.19■□□□□ 0.82
SNX13-206ENST00000474067 ARNT2Q9HBZ2 717 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 CPNE7Q9UBL6 633 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 GUCA1BQ9UMX6 200 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 FAM208BQ5VWN6 2430 aa20.19■□□□□ 0.82
SNX13-206ENST00000474067 PKD1L2Q7Z442 2459 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 UNC13CQ8NB66 2214 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 PRAMEF1O95521 474 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 AGTP01019 485 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 LIPCP11150 499 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 XRCC1P18887 633 aaPredicted RBP20.18■□□□□ 0.82
SNX13-206ENST00000474067 ITPKBP27987 946 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 SLC5A2P31639 672 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 RAB15P59190 212 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 AGAP9Q5VTM2 703 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 CYB5D1Q6P9G0 228 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 AMZ2Q86W34 360 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 SFTPA2Q8IWL1 248 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 CCDC110Q8TBZ0 833 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 ZNF398Q8TD17 642 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 MAIP1Q8WWC4 291 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 CXorf40BQ96DE9 158 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 DCUN1D1Q96GG9 259 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 NUDT22Q9BRQ3 303 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 ASPSCR1Q9BZE9 553 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 SEMA6CQ9H3T2 930 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 PRORYQ9H606 182 aa20.18■□□□□ 0.82
SNX13-206ENST00000474067 PACSIN2Q9UNF0 486 aaPredicted RBP20.18■□□□□ 0.82
SNX13-206ENST00000474067 TRBV23OR9-2A0A075B6M9 112 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 IGHV5-10-1A0A0J9YXX1 117 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 A6NCN8 305 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 DDX3YO15523 660 aaKnown RBP20.17■□□□□ 0.82
SNX13-206ENST00000474067 THRAP10827 490 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 ITGALP20701 1170 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 ADRA1AP35348 466 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 MAPK10P53779 464 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 CXADRP78310 365 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 RHDQ02161 417 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 KLF1Q13351 362 aaPredicted RBP20.17■□□□□ 0.82
SNX13-206ENST00000474067 NFATC2Q13469 925 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 CHRNA6Q15825 494 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 ABRAXAS1Q6UWZ7 409 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 ZNF662Q6ZS27 426 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 CCDC74BQ96LY2 380 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 TEFMQ96QE5 360 aaKnown RBP20.17■□□□□ 0.82
SNX13-206ENST00000474067 TAAR9Q96RI9 348 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 VPS37BQ9H9H4 285 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 CAPN6Q9Y6Q1 641 aa20.17■□□□□ 0.82
SNX13-206ENST00000474067 SCN8AQ9UQD0 1980 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 A0A1W2PNU3 283 aaPredicted RBP20.16■□□□□ 0.82
SNX13-206ENST00000474067 VAC14Q08AM6 782 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 DMPKQ09013 629 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 RPS6KA1Q15418 735 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 PLA2G4EQ3MJ16 856 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 ZNF449Q6P9G9 518 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 KLHL35Q6PF15 583 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 FAM71DQ8N9W8 422 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 OR4K2Q8NGD2 314 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 ZPBPQ9BS86 351 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 ASB8Q9H765 288 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 ARFGAP3Q9NP61 516 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 PRDM8Q9NQV8 689 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 TRIM10Q9UDY6 481 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 CRLS1Q9UJA2 301 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 DNAJC16Q9Y2G8 782 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 SLC30A1Q9Y6M5 507 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 FREM2Q5SZK8 3169 aa20.16■□□□□ 0.82
SNX13-206ENST00000474067 F8W8V4 182 aa20.15■□□□□ 0.82
SNX13-206ENST00000474067 TK2O00142 265 aa20.15■□□□□ 0.82
SNX13-206ENST00000474067 TOX3O15405 576 aaPredicted RBP20.15■□□□□ 0.82
SNX13-206ENST00000474067 MTX2O75431 263 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms