RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 OLIG2Q13516 323 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 SERINC3Q13530 473 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 EIF4EBP2Q13542 120 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CYLC2Q14093 348 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CSHL1Q14406 222 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ACAP2Q15057 778 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CNGA3Q16281 694 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ACCSLQ4AC99 568 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 AARS2Q5JTZ9 985 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IL31Q6EBC2 164 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ESRP1Q6NXG1 681 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IRGCQ6NXR0 463 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 FBXL22Q6P050 247 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ZFP1Q6P2D0 407 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 FUT10Q6P4F1 479 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 KDELC1Q6UW63 502 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 RANBP10Q6VN20 620 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 LRRC74BQ6ZQY2 392 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ARHGAP36Q6ZRI8 547 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 KDELC2Q7Z4H8 507 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF280BQ86YH2 543 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 HERC6Q8IVU3 1022 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TMEM151BQ8IW70 566 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 LGI2Q8N0V4 545 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 FSTL5Q8N475 847 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 PAF1Q8N7H5 531 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF781Q8N8C0 355 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 MAB21L3Q8N8X9 362 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 KYQ8NBH2 561 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ATAD1Q8NBU5 361 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CEP70Q8NHQ1 597 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ACTRT2Q8TDY3 377 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 USP13Q92995 863 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 AZIN2Q96A70 460 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ZNF512Q96ME7 567 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TTC1Q99614 292 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 GORASP1Q9BQQ3 440 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 EBF4Q9BQW3 602 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TTPALQ9BTX7 342 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 GATA5Q9BWX5 397 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 ADGRE3Q9BY15 652 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 MRPL1Q9BYD6 325 aaKnown RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IRF2BPLQ9H1B7 796 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 POMKQ9H5K3 350 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 EFCAB1Q9HAE3 211 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 NMUR1Q9HB89 426 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 POPDC3Q9HBV1 291 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 SYTL2Q9HCH5 934 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TREX1Q9NSU2 369 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IL37Q9NZH6 218 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TRPM5Q9NZQ8 1165 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 KIAA1522Q9P206 1035 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 UXTQ9UBK9 157 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 UBA2Q9UBT2 640 aaPredicted RBP5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 SCOCQ9UIL1 159 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 NUDT5Q9UKK9 219 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 RIMKLBQ9ULI2 386 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 VWA7Q9Y334 891 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 LRRC42Q9Y546 428 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 KCTD3Q9Y597 815 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 TSC2P49815 1807 aa5.87□□□□□ -1.47
ATPAF1-204ENST00000474020 CASP8AP2Q9UKL3 1982 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 FAM92AA1XBS5 289 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 MTMR11A4FU01 709 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 C2orf81A6NN90 581 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DRGXA6NNA5 263 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SLC38A8A6NNN8 435 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TBKBP1A7MCY6 615 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 SYCE1LA8MT33 242 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 MEI4A8MW99 385 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 GOLGA8TH3BQL2 631 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 MATN2O00339 956 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NEMP1O14524 444 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ACSL4O60488 711 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 CCNT2O60583 730 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TLR5O60602 858 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PRAMEF11O60813 436 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 VPS4BO75351 444 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NDUFS3O75489 264 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 KRT36O76013 467 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 IPO13O94829 963 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NDST3O95803 873 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TOP3BO95985 862 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 CHEK2O96017 543 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 RHOCP08134 193 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ANPEPP15144 967 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 PIK3R1P27986 724 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ABCG1P45844 678 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ALDH1A3P47895 512 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 LEPRP48357 1165 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 ARCN1P48444 511 aaKnown RBP5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NUDT2P50583 147 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 EPHB1P54762 984 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 NAGLUP54802 743 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 TAS2R39P59534 338 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DSG1Q02413 1049 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 DSC2Q02487 901 aa5.86□□□□□ -1.47
ATPAF1-204ENST00000474020 RAD51Q06609 339 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms