RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 TAZQ16635 292 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 PRSS42Q7Z5A4 293 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 RHOT1Q8IXI2 618 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHD3-209ENST00000473376 APOBEC4Q8WW27 367 aaKnown RBP13.34□□□□□ -0.27
CHD3-209ENST00000473376 ZFPM2Q8WW38 1151 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 COL26A1Q96A83 441 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 TEKT5Q96M29 485 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 GPR63Q9BZJ6 419 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 PRDM8Q9NQV8 689 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 ZNF711Q9Y462 761 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 KCTD3Q9Y597 815 aa13.34□□□□□ -0.27
CHD3-209ENST00000473376 UBR5O95071 2799 aaPredicted RBP13.34□□□□□ -0.27
CHD3-209ENST00000473376 ZFC3H1O60293 1989 aaKnown RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 A0A0A6YYK5 440 aaPredicted RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 SNX2O60749 519 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 CDK14O94921 469 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 MT-ND3P03897 115 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 BPIP17213 487 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 SLC19A1P41440 591 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 CDC20Q12834 499 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 GALNT3Q14435 633 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 PRKD1Q15139 912 aaPredicted RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHD3-209ENST00000473376 KLHL35Q6PF15 583 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 TIPARPQ7Z3E1 657 aaKnown RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 ZNF761Q86XN6 746 aaPredicted RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 CARFQ8N187 725 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 JPH3Q8WXH2 748 aaPredicted RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 KLHL6Q8WZ60 621 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 SEC14L1Q92503 715 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 ZDHHC12Q96GR4 267 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 CCDC42Q96M95 316 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 AGAP3Q96P47 875 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 C19orf43Q9BQ61 176 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 PACSIN1Q9BY11 444 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 ZCCHC2Q9C0B9 1178 aaKnown RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 GLOD4Q9HC38 313 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 ZNF624Q9P2J8 865 aaPredicted RBP13.33□□□□□ -0.28
CHD3-209ENST00000473376 FAM153AQ9UHL3 310 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 PCDHGA6Q9Y5G7 932 aa13.33□□□□□ -0.28
CHD3-209ENST00000473376 LOC101059948A0A1B0GTJ6 334 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 A8MU76 341 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 AGRPO00253 132 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 ARHGAP6O43182 974 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 FGF5P12034 268 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 AMD1P17707 334 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 CASRP41180 1078 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 CAPZBP47756 277 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 PPM1FP49593 454 aaPredicted RBP13.32□□□□□ -0.28
CHD3-209ENST00000473376 TMEM115Q12893 351 aaPredicted RBP13.32□□□□□ -0.28
CHD3-209ENST00000473376 SEPT6Q14141 434 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 INSCQ1MX18 579 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 ODF2Q5BJF6 829 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 KDELC2Q7Z4H8 507 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 C11orf96Q7Z7L8 435 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 KMT5CQ86Y97 462 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 CPNE8Q86YQ8 564 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 ZNF547Q8IVP9 402 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 TRIM48Q8IWZ4 208 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 TFB1MQ8WVM0 346 aaKnown RBP13.32□□□□□ -0.28
CHD3-209ENST00000473376 UBXN4Q92575 508 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 ZNF514Q96K75 400 aaPredicted RBP13.32□□□□□ -0.28
CHD3-209ENST00000473376 TBC1D10AQ9BXI6 508 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 ABHD10Q9NUJ1 306 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 OGFRQ9NZT2 677 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 SLC23A2Q9UGH3 650 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 KCND3Q9UK17 655 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 SHOC2Q9UQ13 582 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 PCDHB3Q9Y5E6 796 aa13.32□□□□□ -0.28
CHD3-209ENST00000473376 PSTPIP1O43586 416 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 PYGMP11217 842 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 BRAFP15056 766 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 TCN2P20062 427 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 PTPN3P26045 913 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 HALP42357 657 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 CDKN2BP42772 138 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 TNNT3P45378 269 aaPredicted RBP13.31□□□□□ -0.28
CHD3-209ENST00000473376 ITGA9Q13797 1035 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 GTF2H3Q13889 308 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 SNAP47Q5SQN1 464 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 LDLRAP1Q5SW96 308 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 C6orf15Q6UXA7 325 aaPredicted RBP13.31□□□□□ -0.28
CHD3-209ENST00000473376 BEND7Q8N7W2 519 aaPredicted RBP13.31□□□□□ -0.28
CHD3-209ENST00000473376 C9orf43Q8TAL5 461 aaPredicted RBP13.31□□□□□ -0.28
CHD3-209ENST00000473376 STARD8Q92502 1023 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 TTC25Q96NG3 672 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 FCRL5Q96RD9 977 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 CD180Q99467 661 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 CTRCQ99895 268 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 OSGEPL1Q9H4B0 414 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 NHEJ1Q9H9Q4 299 aaPredicted RBP13.31□□□□□ -0.28
CHD3-209ENST00000473376 SMOXQ9NWM0 555 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 SCHIP1Q9P0W5 487 aaPredicted RBP13.31□□□□□ -0.28
CHD3-209ENST00000473376 TRHDEQ9UKU6 1024 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 SLC30A1Q9Y6M5 507 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 RPS6KL1Q9Y6S9 549 aa13.31□□□□□ -0.28
CHD3-209ENST00000473376 PDZK1P1A8MUH7 402 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms