RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CHID1Q9BWS9 393 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 CCSER2Q9H7U1 834 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 POPDC3Q9HBV1 291 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 TBC1D23Q9NUY8 699 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 Q9Y3F1 56 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 ZNF711Q9Y462 761 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 PRR35P0CG20 571 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 UMPSP11172 480 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 ELK4P28324 431 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 ZNF235Q14590 738 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 TMEM199Q8N511 208 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 OR4K2Q8NGD2 314 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 TSPEARQ8WU66 669 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 POLR1EQ9GZS1 481 aaKnown RBP20.92■□□□□ 0.94
COL18A1-207ENST00000473212 MARCH2Q9P0N8 246 aa20.92■□□□□ 0.94
COL18A1-207ENST00000473212 EVLQ9UI08 416 aaPredicted RBP20.92■□□□□ 0.94
COL18A1-207ENST00000473212 LEF1Q9UJU2 399 aaPredicted RBP20.92■□□□□ 0.94
COL18A1-207ENST00000473212 HOXB8P17481 243 aaPredicted RBP20.91■□□□□ 0.94
COL18A1-207ENST00000473212 OR1G1P47890 313 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 POLR2JP52435 117 aaKnown RBP20.91■□□□□ 0.94
COL18A1-207ENST00000473212 TAF10Q12962 218 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 CCNYL2Q5T2Q4 361 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 TMEM214Q6NUQ4 689 aaKnown RBP20.91■□□□□ 0.94
COL18A1-207ENST00000473212 RTN4RL1Q86UN2 441 aaPredicted RBP20.91■□□□□ 0.94
COL18A1-207ENST00000473212 KLHL23Q8NBE8 558 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 FATE1Q969F0 183 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 ZNF599Q96NL3 588 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 IL12AP29459 219 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 HLCSP50747 726 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 EEFSECP57772 596 aaKnown RBP20.91■□□□□ 0.94
COL18A1-207ENST00000473212 OR4D2P58180 307 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 PLIN5Q00G26 463 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 AASDHQ4L235 1098 aaPredicted RBP20.91■□□□□ 0.94
COL18A1-207ENST00000473212 PIANPQ8IYJ0 282 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 MUS81Q96NY9 551 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 HCSTQ9UBK5 93 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 PCDHB8Q9UN66 801 aa20.91■□□□□ 0.94
COL18A1-207ENST00000473212 KANSL1LA0AUZ9 987 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 SNX2O60749 519 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 NIPSNAP2O75323 286 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 RPS17P08708 135 aaKnown RBP20.9■□□□□ 0.94
COL18A1-207ENST00000473212 TYMPP19971 482 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 EEF1B2P24534 225 aaKnown RBP20.9■□□□□ 0.94
COL18A1-207ENST00000473212 IL10RBQ08334 325 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 C18orf21Q32NC0 220 aaPredicted RBP20.9■□□□□ 0.94
COL18A1-207ENST00000473212 ZNF829Q3KNS6 432 aaPredicted RBP20.9■□□□□ 0.94
COL18A1-207ENST00000473212 CLLU1OSQ5K130 101 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 RALGPS2Q86X27 583 aaPredicted RBP20.9■□□□□ 0.94
COL18A1-207ENST00000473212 MDGA1Q8NFP4 955 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 BRSK1Q8TDC3 778 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 OSCP1Q8WVF1 389 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 TANKQ92844 425 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 BORCS5Q969J3 196 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 FBXO32Q969P5 355 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 BTN2A3PQ96KV6 586 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 ZFYVE28Q9HCC9 887 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 ZNF639Q9UID6 485 aa20.9■□□□□ 0.94
COL18A1-207ENST00000473212 H0Y858 1186 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 BOLA2-SMG1P6H3BVE0 249 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 TSPAN3O60637 253 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 ALBP02768 609 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 MATN1P21941 496 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 UGT1A1P22309 533 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 UGT1A4P22310 534 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 UGT1A3P35503 534 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 UGT1A5P35504 534 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 FAM117BQ6P1L5 589 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 SLC2A7Q6PXP3 512 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 ZNF598Q86UK7 904 aaKnown RBP20.89■□□□□ 0.94
COL18A1-207ENST00000473212 TERB1Q8NA31 727 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 FUBP1Q96AE4 644 aaKnown RBP20.89■□□□□ 0.94
COL18A1-207ENST00000473212 BDH2Q9BUT1 245 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 ARHGAP39Q9C0H5 1083 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 DERL2Q9GZP9 239 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 SYTL2Q9HCH5 934 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 BPIFA1Q9NP55 256 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 TLR9Q9NR96 1032 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.89■□□□□ 0.94
COL18A1-207ENST00000473212 VWA8A3KMH1 1905 aa20.89■□□□□ 0.94
COL18A1-207ENST00000473212 BTN3A1O00481 513 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 IGHA2P01877 340 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 FGF1P05230 155 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 BMP1P13497 986 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 OGNP20774 298 aaKnown RBP20.89■□□□□ 0.93
COL18A1-207ENST00000473212 PSMD7P51665 324 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 HK3P52790 923 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 C21orf59P57076 290 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 RBBP7Q16576 425 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 ANKRD26P1Q6NSI1 321 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 ATP6V0D2Q8N8Y2 350 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 SIDT2Q8NBJ9 832 aaKnown RBP20.89■□□□□ 0.93
COL18A1-207ENST00000473212 TAS2R13Q9NYV9 303 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 SUN2Q9UH99 717 aa20.89■□□□□ 0.93
COL18A1-207ENST00000473212 IQCF5A8MTL0 148 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 PRAMEF11O60813 436 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 ASGR1P07306 291 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 ZNF182P17025 639 aaPredicted RBP20.88■□□□□ 0.93
COL18A1-207ENST00000473212 HLA-DPA1P20036 260 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 PBX3P40426 434 aa20.88■□□□□ 0.93
COL18A1-207ENST00000473212 RAD51Q06609 339 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms