RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SEPT11Q9NVA2 429 aaKnown RBP18.67■□□□□ 0.58
SORT1-203ENST00000471996 C5AR2Q9P296 337 aa18.67■□□□□ 0.58
SORT1-203ENST00000471996 SLC23A2Q9UGH3 650 aa18.67■□□□□ 0.58
SORT1-203ENST00000471996 PDZK1P1A8MUH7 402 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 CDH6P55285 790 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 PPP1CAP62136 330 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 CDK18Q07002 472 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 GPR18Q14330 331 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 SEPT7Q16181 437 aaKnown RBP18.66■□□□□ 0.58
SORT1-203ENST00000471996 MED25Q71SY5 747 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 MCOLN2Q8IZK6 566 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 LYSMD1Q96S90 227 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 UNKQ9C0B0 810 aaKnown RBP18.66■□□□□ 0.58
SORT1-203ENST00000471996 OR2AG1Q9H205 316 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 CHST8Q9H2A9 424 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 ZWILCHQ9H900 591 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 NT5MQ9NPB1 228 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 FGF21Q9NSA1 209 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 SNX7Q9UNH6 387 aa18.66■□□□□ 0.58
SORT1-203ENST00000471996 EPHB6O15197 1021 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 PRPSAP2O60256 369 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 MTA2O94776 668 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 JCHAINP01591 159 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 RAB40ALP0C0E4 278 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 EBLN1P0CF75 366 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 BRAFP15056 766 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 MIPP30301 263 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 VAV2P52735 878 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 GPS2Q13227 327 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 CAMK4Q16566 473 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 INSCQ1MX18 579 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 TMCO3Q6UWJ1 677 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 ABRAXAS1Q6UWZ7 409 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 ATPAF2Q8N5M1 289 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 BARD1Q99728 777 aaKnown RBP18.65■□□□□ 0.58
SORT1-203ENST00000471996 TRIM39Q9HCM9 518 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 ARFGAP3Q9NP61 516 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 ETNK2Q9NVF9 386 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 CHKBQ9Y259 395 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 B3GNT3Q9Y2A9 372 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 ZFHX3Q15911 3703 aa18.65■□□□□ 0.58
SORT1-203ENST00000471996 CSMD2Q7Z408 3487 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 RGSL1A5PLK6 1076 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 OR52A4PA6NMU1 304 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 GPR89AB7ZAQ6 455 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 CHUKO15111 745 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 SCRG1O75711 98 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 PRLP01236 227 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 GPR89BP0CG08 455 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 AMPD1P23109 780 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 RRADP55042 308 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 MAMLD1Q13495 774 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 IHHQ14623 411 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 TDRD12Q587J7 1177 aaKnown RBP18.64■□□□□ 0.57
SORT1-203ENST00000471996 TCP11X2Q5H9J9 407 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 CRB2Q5IJ48 1285 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 ZNF648Q5T619 568 aaPredicted RBP18.64■□□□□ 0.57
SORT1-203ENST00000471996 VWA5B1Q5TIE3 1220 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 SP5Q6BEB4 398 aaPredicted RBP18.64■□□□□ 0.57
SORT1-203ENST00000471996 ACAD10Q6JQN1 1059 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 CERS6Q6ZMG9 384 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 KMT5CQ86Y97 462 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 TEX26Q8N6G2 289 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 ENDOVQ8N8Q3 282 aaKnown RBP18.64■□□□□ 0.57
SORT1-203ENST00000471996 SLC38A9Q8NBW4 561 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 AGPAT1Q99943 283 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 MLPHQ9BV36 600 aaPredicted RBP18.64■□□□□ 0.57
SORT1-203ENST00000471996 PKD2L2Q9NZM6 624 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 TMEM63CQ9P1W3 806 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 TCFL5Q9UL49 500 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 DNAJC16Q9Y2G8 782 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 COPG1Q9Y678 874 aaKnown RBP18.64■□□□□ 0.57
SORT1-203ENST00000471996 APCP25054 2843 aa18.64■□□□□ 0.57
SORT1-203ENST00000471996 C1orf232A0A0U1RR37 186 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 H3BRJ5 948 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 RNF8O76064 485 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 KLK3P07288 261 aaPredicted RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 ZNF7P17097 686 aaPredicted RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 RPL10P27635 214 aaKnown RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 ARL4DP49703 201 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 TUBB4BP68371 445 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 ITKQ08881 620 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 RAPSNQ13702 412 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 TUBB2AQ13885 445 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 PLA2G4EQ3MJ16 856 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 AGAP9Q5VTM2 703 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 CRTC3Q6UUV7 619 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 WASH2PQ6VEQ5 465 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 ADGRG6Q86SQ4 1221 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 ZC3H18Q86VM9 953 aaKnown RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 TMEM126BQ8IUX1 230 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 MCEMP1Q8IX19 187 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 D2HGDHQ8N465 521 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 ZBTB2Q8N680 514 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 CXorf40BQ96DE9 158 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 PCMTD1Q96MG8 357 aaPredicted RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 LRFN5Q96NI6 719 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 TUBB2BQ9BVA1 445 aa18.63■□□□□ 0.57
SORT1-203ENST00000471996 TDRD1Q9BXT4 1180 aaKnown RBP18.63■□□□□ 0.57
SORT1-203ENST00000471996 NLNQ9BYT8 704 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms