RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 RHOBTB1O94844 696 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 ESR1P03372 595 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 UGT2B4P06133 528 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 SBK3P0C264 359 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PKMP14618 531 aaKnown RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 ITGALP20701 1170 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 FMO4P31512 558 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 SKIV2L2P42285 1042 aaKnown RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 DNAJB13P59910 316 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PTPRRQ15256 657 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 GALNTL6Q49A17 601 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 GPR33Q49SQ1 333 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 ZC3H14Q6PJT7 736 aaKnown RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 KIAA1324Q6UXG2 1013 aaKnown RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 SNX20Q7Z614 316 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PIANPQ8IYJ0 282 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 FITM2Q8N6M3 262 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 VOPP1Q96AW1 172 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 WWP1Q9H0M0 922 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 STN1Q9H668 368 aaKnown RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 KCNK13Q9HB14 408 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PCDHB1Q9Y5F3 818 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 MUC22E2RYF6 1773 aaPredicted RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 CCDC189A1A4V9 331 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 NPC1O15118 1278 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 CLDN7O95471 211 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 HOXA6P31267 233 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 SERPINB5P36952 375 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 SPAM1P38567 509 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 HK2P52789 917 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PGGT1BP53609 377 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 TECRLQ5HYJ1 363 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PSAPL1Q6NUJ1 521 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 UGT3A1Q6NUS8 523 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 CRTC1Q6UUV9 634 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PRR23BQ6ZRT6 265 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 WDR5BQ86VZ2 330 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 ZSWIM9Q86XI8 627 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PNPLA1Q8N8W4 532 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 GRIN3AQ8TCU5 1115 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 MRGPRX1Q96LB2 322 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 GATA5Q9BWX5 397 aaPredicted RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 TMEM120AQ9BXJ8 343 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 DRC3Q9H069 523 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 PRSS16Q9NQE7 514 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 EBF1Q9UH73 591 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 DNAJC16Q9Y2G8 782 aa17.32■□□□□ 0.36
HSPG2-208ENST00000471322 RIF1Q5UIP0 2472 aaKnown RBP17.32■□□□□ 0.36
HSPG2-208ENST00000471322 EP300Q09472 2414 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-208ENST00000471322 ITM2AO43736 263 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 DLX3O60479 287 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 VPS26AO75436 327 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 ATP5HO75947 161 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 PRAMEF1O95521 474 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 HSPA4LO95757 839 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 PRSS56P0CW18 603 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 CYP2A6P11509 494 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-208ENST00000471322 ZNF7P17097 686 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-208ENST00000471322 NBL1P41271 181 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 SLC22A9Q8IVM8 553 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 SPATA6LQ8N4H0 392 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 NKAPQ8N5F7 415 aaKnown RBP17.31■□□□□ 0.36
HSPG2-208ENST00000471322 CHST14Q8NCH0 376 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 ANKRD49Q8WVL7 239 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 KLHL32Q96NJ5 620 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 BIRC8Q96P09 236 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 C20orf27Q9GZN8 174 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 ZNF395Q9H8N7 513 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-208ENST00000471322 IL26Q9NPH9 171 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 DKK3Q9UBP4 350 aa17.31■□□□□ 0.36
HSPG2-208ENST00000471322 FNDC3AQ9Y2H6 1198 aaKnown RBP17.31■□□□□ 0.36
HSPG2-208ENST00000471322 OAS3Q9Y6K5 1087 aaKnown RBP17.31■□□□□ 0.36
HSPG2-208ENST00000471322 DMXL1Q9Y485 3027 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 GLYATL1P3A0A0U1RQE8 302 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 NPIPB15A6NHN6 443 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 H3BMM5 538 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 PRMT5O14744 637 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 UBOX5O94941 541 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 ZNF37AP17032 561 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 BPIP17213 487 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 CDKN1CP49918 316 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 COPAP53621 1224 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 ATP6V0D1P61421 351 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 TIAL1Q01085 375 aaKnown RBP eCLIP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 ZBTB16Q05516 673 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 BNIP1Q12981 228 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 NFATC2Q13469 925 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 HNRNPA1L2Q32P51 320 aaKnown RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 TMEM207Q6UWW9 146 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 CEP68Q76N32 757 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 PIWIL4Q7Z3Z4 852 aaKnown RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 PIM3Q86V86 326 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 TMPRSS6Q8IU80 811 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 RHEBL1Q8TAI7 183 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 KCNJ9Q92806 393 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 SORT1Q99523 831 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 TUBB6Q9BUF5 446 aa17.3■□□□□ 0.36
HSPG2-208ENST00000471322 ILKAPQ9H0C8 392 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 TFB2MQ9H5Q4 396 aaKnown RBP17.3■□□□□ 0.36
HSPG2-208ENST00000471322 ASB8Q9H765 288 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms