RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 SERPINB12Q96P63 405 aa19.49■□□□□ 0.71
HDAC7-220ENST00000471235 DPEP2Q9H4A9 486 aa19.49■□□□□ 0.71
HDAC7-220ENST00000471235 MRM3Q9HC36 420 aaKnown RBP19.49■□□□□ 0.71
HDAC7-220ENST00000471235 XAB2Q9HCS7 855 aaKnown RBP19.49■□□□□ 0.71
HDAC7-220ENST00000471235 CHRAC1Q9NRG0 131 aa19.49■□□□□ 0.71
HDAC7-220ENST00000471235 GULP1Q9UBP9 304 aa19.49■□□□□ 0.71
HDAC7-220ENST00000471235 KMOO15229 486 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 MSH3P20585 1137 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 ACRV1P26436 265 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 IVDP26440 423 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 RPIAP49247 311 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 DUSP3P51452 185 aaPredicted RBP19.48■□□□□ 0.71
HDAC7-220ENST00000471235 B4GALNT1Q00973 533 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 FOXC1Q12948 553 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 OGFOD3Q6PK18 319 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 AFTPHQ6ULP2 937 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 EFL1Q7Z2Z2 1120 aaKnown RBP19.48■□□□□ 0.71
HDAC7-220ENST00000471235 ZNF572Q7Z3I7 529 aaPredicted RBP19.48■□□□□ 0.71
HDAC7-220ENST00000471235 C11orf96Q7Z7L8 435 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 SERPINA9Q86WD7 417 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 PIANPQ8IYJ0 282 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 IFI44Q8TCB0 444 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 ZDHHC1Q8WTX9 485 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 ADAMTS14Q8WXS8 1223 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 ZNF592Q92610 1267 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 HDAC10Q969S8 669 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 TTC25Q96NG3 672 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 TIMM29Q9BSF4 260 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 TREX1Q9NSU2 369 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 SLC23A2Q9UGH3 650 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 CDC23Q9UJX2 597 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 SOX13Q9UN79 622 aa19.48■□□□□ 0.71
HDAC7-220ENST00000471235 EME2A4GXA9 379 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-220ENST00000471235 URI1O94763 535 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-220ENST00000471235 GOT2P00505 430 aaKnown RBP19.47■□□□□ 0.71
HDAC7-220ENST00000471235 ZNF7P17097 686 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-220ENST00000471235 NMBRP28336 390 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 PMLP29590 882 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 MAGEA3P43357 314 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 CKAP4Q07065 602 aaKnown RBP19.47■□□□□ 0.71
HDAC7-220ENST00000471235 ILKQ13418 452 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 DBN1Q16643 649 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 INSCQ1MX18 579 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 C14orf28Q4W4Y0 310 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 PERM1Q5SV97 790 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 DHRS13Q6UX07 377 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 DET1Q7L5Y6 550 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 RAB44Q7Z6P3 723 aaPredicted RBP19.47■□□□□ 0.71
HDAC7-220ENST00000471235 NAT14Q8WUY8 206 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 PATE1Q8WXA2 126 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 COPS8Q99627 209 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 KIFC1Q9BW19 673 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 ZDHHC3Q9NYG2 299 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 PADI4Q9UM07 663 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 SPEGQ15772 3267 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 UNC13CQ8NB66 2214 aa19.47■□□□□ 0.71
HDAC7-220ENST00000471235 IGLV3-16A0A075B6K0 115 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 CPED1A4D0V7 1026 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 PRR19A6NJB7 356 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 OR2AG2A6NM03 316 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 KIF2AO00139 706 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-220ENST00000471235 SGTAO43765 313 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 TRIM16O95361 564 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 EML2O95834 649 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 TOP3BO95985 862 aaKnown RBP19.46■□□□□ 0.71
HDAC7-220ENST00000471235 CLCNKAP51800 687 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 MAZP56270 477 aaKnown RBP19.46■□□□□ 0.71
HDAC7-220ENST00000471235 PRAMEP78395 509 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 HLTFQ14527 1009 aaKnown RBP eCLIP19.46■□□□□ 0.71
HDAC7-220ENST00000471235 TMEM220Q6QAJ8 160 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 TAS2R42Q7RTR8 314 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 PCGF5Q86SE9 256 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 HOOK3Q86VS8 718 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 C17orf82Q86X59 251 aaPredicted RBP19.46■□□□□ 0.71
HDAC7-220ENST00000471235 NAGSQ8N159 534 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 AGGF1Q8N302 714 aaeCLIP19.46■□□□□ 0.71
HDAC7-220ENST00000471235 NAT6Q93015 286 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 DCUN1D1Q96GG9 259 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 KLC4Q9NSK0 619 aa19.46■□□□□ 0.71
HDAC7-220ENST00000471235 A6NCN8 305 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 HYAL3O43820 417 aaPredicted RBP19.45■□□□□ 0.7
HDAC7-220ENST00000471235 GP1BAP07359 652 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 MRPS25P82663 173 aaKnown RBP19.45■□□□□ 0.7
HDAC7-220ENST00000471235 BCL7AQ4VC05 210 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 FNBP1LQ5T0N5 605 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 ARMC3Q5W041 872 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 CES3Q6UWW8 571 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 CHCHD4Q8N4Q1 142 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 OR6P1Q8NGX9 317 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 HEXDCQ8WVB3 486 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 CCDC74AQ96AQ1 378 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 MFSD3Q96ES6 412 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 TRIM56Q9BRZ2 755 aaKnown RBP19.45■□□□□ 0.7
HDAC7-220ENST00000471235 TRIM31Q9BZY9 425 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 OSGEPL1Q9H4B0 414 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 TBC1D29Q9UFV1 150 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 WASF3Q9UPY6 502 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 DNAJC16Q9Y2G8 782 aa19.45■□□□□ 0.7
HDAC7-220ENST00000471235 FAM187AA6NFU0 413 aa19.44■□□□□ 0.7
HDAC7-220ENST00000471235 CFAP99D6REC4 459 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms