RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 MT-ND2P03891 347 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 LTA4HP09960 611 aaKnown RBP9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 GRK3P35626 688 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 GABARAPL2P60520 117 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 UFM1P61960 85 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 DAB2P98082 770 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 GALK2Q01415 458 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 CHRNEQ04844 493 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 YWHAHQ04917 246 aaPredicted RBP9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 TPRG1LQ5T0D9 272 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 FAM72AQ5TYM5 149 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 NAPEPLDQ6IQ20 393 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 FAM72DQ6L9T8 149 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 FAM72BQ86X60 149 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 OR8H2Q8N162 312 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 LPAR1Q92633 364 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 OMA1Q96E52 524 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 NSUN5Q96P11 429 aaKnown RBP9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 CCDC177Q9NQR7 707 aaPredicted RBP9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 FZD10Q9ULW2 581 aa9.46□□□□□ -0.9
NHLRC3-203ENST00000470258 LOC105371267A0A1B0GV96 52 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SAGE2PA6NJ88 616 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 UPK1AO00322 258 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CCL22O00626 93 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 AZIN1O14977 448 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 MITFO75030 526 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 PTTG1O95997 202 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 GOT2P00505 430 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 DNTTP04053 509 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 LCKP06239 509 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 DDX5P17844 614 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SLC26A2P50443 739 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 TPI1P60174 286 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 TOP3AQ13472 1001 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 RAPSNQ13702 412 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CDK10Q15131 360 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SMN1Q16637 294 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 PFKFB4Q16877 469 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF181Q2M3W8 571 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 NXNL2Q5VZ03 156 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 LAIR2Q6ISS4 152 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 BLOC1S3Q6QNY0 202 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 BEND5Q7L4P6 421 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 NLGN4XQ8N0W4 816 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 DTWD1Q8N5C7 304 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 PTGR2Q8N8N7 351 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SPERTQ8NA61 448 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 BPIFB1Q8TDL5 484 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 NCLNQ969V3 563 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 FICDQ9BVA6 458 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 NUAK2Q9H093 628 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 DPEP3Q9H4B8 488 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 RPAP3Q9H6T3 665 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 KAT8Q9H7Z6 458 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 RASSF1Q9NS23 344 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF639Q9UID6 485 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 MAU2Q9Y6X3 613 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 MICAL3Q7RTP6 2002 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 A0A1W2PP18 115 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 EVPLLA8MZ36 301 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 MTSS1O43312 755 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CYP7B1O75881 506 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 NTRK1P04629 796 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 RBP1P09455 135 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 RAP2AP10114 183 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 NOS2P35228 1153 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 KCNC1P48547 511 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 STAT5BP51692 787 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SNX16P57768 344 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 GHRHRQ02643 423 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CBX2Q14781 532 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 TMEM132DQ14C87 1099 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 RAP1GAP2Q684P5 730 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF544Q6NX49 715 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CYP20A1Q6UW02 462 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 PIM3Q86V86 326 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 LACC1Q8IV20 430 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 DCBLD1Q8N8Z6 715 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 PPHLN1Q8NEY8 458 aaKnown RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 OR6F1Q8NGZ6 308 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 HCAR2Q8TDS4 363 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 NUDT8Q8WV74 236 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SLC35F5Q8WV83 523 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CDHR1Q96JP9 859 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF300Q96RE9 604 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 MCMBPQ9BTE3 642 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 TBCDQ9BTW9 1192 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF717Q9BY31 904 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CRNNQ9UBG3 495 aaPredicted RBP9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 POLG2Q9UHN1 485 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 CSADQ9Y600 493 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 SLX4Q8IY92 1834 aa9.45□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF487B1APH4 448 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 FAM20BO75063 409 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 RECQL5O94762 991 aaPredicted RBP9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 CAPN1P07384 714 aa9.44□□□□□ -0.9
NHLRC3-203ENST00000470258 ZNF37AP17032 561 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms