RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 KIF26BQ2KJY2 2108 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 ATP13A5Q4VNC0 1218 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 KAZNQ674X7 775 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 PDPK2PQ6A1A2 396 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 ABRAXAS1Q6UWZ7 409 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 TMEM26Q6ZUK4 368 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 ZNF547Q8IVP9 402 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 TRIM48Q8IWZ4 208 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 GDAP1Q8TB36 358 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 TFB1MQ8WVM0 346 aaKnown RBP13.08□□□□□ -0.32
CPSF4-210ENST00000469897 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 TGM7Q96PF1 710 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 ZPBPQ9BS86 351 aa13.08□□□□□ -0.32
CPSF4-210ENST00000469897 GPN2Q9H9Y4 310 aaPredicted RBP13.08□□□□□ -0.32
CPSF4-210ENST00000469897 LOC285095A0A1B0GVY8 99 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 LILRA5A6NI73 299 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 ZNF891A8MT65 544 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 GPR89AB7ZAQ6 455 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 F5H423 210 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 CAPN5O15484 640 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 SPOPO43791 374 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UGT1A9O60656 530 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 CST8O60676 142 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 PPFIA2O75334 1257 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 GPR89BP0CG08 455 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 BRAFP15056 766 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UGT1A6P19224 532 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 IDSP22304 550 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UGT1A1P22309 533 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UGT1A4P22310 534 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 CDKN2BP42772 138 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 CCR10P46092 362 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 LEPRP48357 1165 aaKnown RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 POLE2P56282 527 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 PRKD1Q15139 912 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 ATG14Q6ZNE5 492 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 BZW1Q7L1Q6 419 aaKnown RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 PID1Q7Z2X4 250 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 PTRH1Q86Y79 214 aaKnown RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 SLC25A41Q8N5S1 370 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 AVL9Q8NBF6 648 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 KIAA1143Q96AT1 154 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 SLC45A3Q96JT2 553 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 SRPK1Q96SB4 655 aaKnown RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 EPB41L1Q9H4G0 881 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UCK1Q9HA47 277 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UGT1A7Q9HAW7 530 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UGT1A10Q9HAW8 530 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 UGT1A8Q9HAW9 530 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 SLC40A1Q9NP59 571 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 IL26Q9NPH9 171 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 NFKBIL1Q9UBC1 381 aaPredicted RBP13.07□□□□□ -0.32
CPSF4-210ENST00000469897 FAM153AQ9UHL3 310 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 ALG6Q9Y672 507 aa13.07□□□□□ -0.32
CPSF4-210ENST00000469897 PRR19A6NJB7 356 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 OR52A4PA6NMU1 304 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 BUD23O43709 281 aaKnown RBP13.06□□□□□ -0.32
CPSF4-210ENST00000469897 KIF1CO43896 1103 aaKnown RBP13.06□□□□□ -0.32
CPSF4-210ENST00000469897 C9P02748 559 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 ZNF28P17035 718 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 NFKB1P19838 968 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 CA5AP35218 305 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 HMGCLP35914 325 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 MAGEA1P43355 309 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 CHRNA4P43681 627 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 CSRP3P50461 194 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 WNT3AP56704 352 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 SH3BP2P78314 561 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 TFDP2Q14188 446 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 TCEAL1Q15170 157 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 SLC14A2Q15849 920 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 TAZQ16635 292 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 SIRPB2Q5JXA9 342 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 KDELC1Q6UW63 502 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 SPOCD1Q6ZMY3 1216 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 C11orf96Q7Z7L8 435 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 ZC3H18Q86VM9 953 aaKnown RBP13.06□□□□□ -0.32
CPSF4-210ENST00000469897 RNF214Q8ND24 703 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 P3H4Q92791 437 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 ELMO2Q96JJ3 720 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 TTC25Q96NG3 672 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 VPS35Q96QK1 796 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 GOLPH3Q9H4A6 298 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 INTUQ9ULD6 942 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 WDR37Q9Y2I8 494 aa13.06□□□□□ -0.32
CPSF4-210ENST00000469897 TMEM184BQ9Y519 407 aaPredicted RBP13.06□□□□□ -0.32
CPSF4-210ENST00000469897 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 TERTO14746 1132 aaKnown RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 POP7O75817 140 aaKnown RBP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 RASSF9O75901 435 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 ZRANB2O95218 330 aaKnown RBP eCLIP13.05□□□□□ -0.32
CPSF4-210ENST00000469897 DLGAP3O95886 979 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 EPOP01588 193 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 ANKRD34CP0C6C1 535 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 PTMSP20962 102 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 ABHD18Q0P651 414 aa13.05□□□□□ -0.32
CPSF4-210ENST00000469897 KCNAB2Q13303 367 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms