RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 MAVSQ7Z434 540 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 ALYREFQ86V81 257 aaKnown RBP17.93■□□□□ 0.46
SMC4-211ENST00000469858 LSMEM2Q8N112 164 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 SKA1Q96BD8 255 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 RILPQ96NA2 401 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 RIOK2Q9BVS4 552 aaKnown RBP17.93■□□□□ 0.46
SMC4-211ENST00000469858 RAD18Q9NS91 495 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 STON1Q9Y6Q2 735 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 C1QTNF3-AMACRE9PGA6 284 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 ANHXE9PGG2 379 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 ADRB3P13945 408 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 MTHFD2P13995 350 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 AKT1P31749 480 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 LIG3P49916 1009 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 CORO7P57737 925 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 NFKB2Q00653 900 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 PRKAA1Q13131 559 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 LRIT3Q3SXY7 679 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 HENMT1Q5T8I9 393 aaKnown RBP17.93■□□□□ 0.46
SMC4-211ENST00000469858 TECPR1Q7Z6L1 1165 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 ZNF513Q8N8E2 541 aaPredicted RBP17.93■□□□□ 0.46
SMC4-211ENST00000469858 PTGR2Q8N8N7 351 aaPredicted RBP17.93■□□□□ 0.46
SMC4-211ENST00000469858 INPP5DQ92835 1189 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 FAM161BQ96MY7 647 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 P2RY13Q9BPV8 354 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 SLC12A4Q9UP95 1085 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 CKAP5Q14008 2032 aa17.93■□□□□ 0.46
SMC4-211ENST00000469858 GFAPP14136 432 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 HNRNPLP14866 589 aaKnown RBP eCLIP17.92■□□□□ 0.462e-15■■■■■ 47.4
SMC4-211ENST00000469858 SCTRP47872 440 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 SEC13P55735 322 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 ELP6Q0PNE2 266 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 PFKFB4Q16877 469 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 ZNF284Q2VY69 593 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 VWA5B1Q5TIE3 1220 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 DET1Q7L5Y6 550 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 CACUL1Q86Y37 369 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 TRAM1L1Q8N609 369 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 FUBP1Q96AE4 644 aaKnown RBP17.92■□□□□ 0.46
SMC4-211ENST00000469858 CNDP1Q96KN2 507 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 SMOXQ9NWM0 555 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 NFKBIL1Q9UBC1 381 aaPredicted RBP17.92■□□□□ 0.46
SMC4-211ENST00000469858 ZDHHC2Q9UIJ5 367 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 COQ6Q9Y2Z9 468 aa17.92■□□□□ 0.46
SMC4-211ENST00000469858 IGLV3-16A0A075B6K0 115 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 NEMP1O14524 444 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 MTX2O75431 263 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 ALOX15P16050 662 aaPredicted RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 IMPDH1P20839 514 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 SERPINB5P36952 375 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 RPL14P50914 215 aaKnown RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 BNIP1Q12981 228 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 ZNF678Q5SXM1 525 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 ERN2Q76MJ5 926 aaKnown RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 CLNKQ7Z7G1 428 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 ZBTB2Q8N680 514 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 L3HYPDHQ96EM0 354 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 ZSCAN5AQ9BUG6 496 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 ACTR5Q9H9F9 607 aaPredicted RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 RGSL1A5PLK6 1076 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 SYCE1LA8MT33 242 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 FADS2P1A8MWK0 482 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 H0Y858 1186 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 PSMD11O00231 422 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 ZNF195O14628 629 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 WNT9AO14904 365 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 DIAPH2O60879 1101 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 SUPT7LO94864 414 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 GM2AP17900 193 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 POU3F3P20264 500 aaPredicted RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 TIE1P35590 1138 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 HERVK_113P63132 956 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 RAB44Q7Z6P3 723 aaPredicted RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 FBXO39Q8N4B4 442 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 AP2M1Q96CW1 435 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 DCUN1D1Q96GG9 259 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 PRR11Q96HE9 360 aaPredicted RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 ERVK-6Q9BXR3 956 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 STN1Q9H668 368 aaKnown RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 COG4Q9H9E3 785 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 SPATS2LQ9NUQ6 558 aaKnown RBP17.91■□□□□ 0.46
SMC4-211ENST00000469858 DNAJC28Q9NX36 388 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 HAO1Q9UJM8 370 aa17.91■□□□□ 0.46
SMC4-211ENST00000469858 NCF1BA6NI72 391 aaPredicted RBP17.9■□□□□ 0.46
SMC4-211ENST00000469858 NCF1CA8MVU1 366 aaPredicted RBP17.9■□□□□ 0.46
SMC4-211ENST00000469858 K7EQS6 105 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 AREL1O15033 823 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 SIX3O95343 332 aaPredicted RBP17.9■□□□□ 0.46
SMC4-211ENST00000469858 OR56A5P0C7T3 313 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 NCF1P14598 390 aaPredicted RBP17.9■□□□□ 0.46
SMC4-211ENST00000469858 RGS4P49798 205 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 IDH3AP50213 366 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 TXNDC11Q6PKC3 985 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 FRMD7Q6ZUT3 714 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 EZH1Q92800 747 aaPredicted RBP17.9■□□□□ 0.46
SMC4-211ENST00000469858 PANX3Q96QZ0 392 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 NMUR2Q9GZQ4 415 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 GSTO2Q9H4Y5 243 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 TMEM265A0A087WTH1 108 aa17.9■□□□□ 0.46
SMC4-211ENST00000469858 GRXCR2A6NFK2 248 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms