RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PDCLQ13371 301 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 CCDC142Q17RM4 750 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 PTCHD3Q3KNS1 767 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 DCAF6Q58WW2 860 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 ODF2Q5BJF6 829 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 BSPRYQ5W0U4 402 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 GJB7Q6PEY0 223 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 BEND5Q7L4P6 421 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 SLC47A2Q86VL8 602 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 DHX40Q8IX18 779 aaKnown RBP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 FAM71AQ8IYT1 594 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 TXLNBQ8N3L3 684 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 ATP6V0D2Q8N8Y2 350 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 DDI1Q8WTU0 396 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 CD101Q93033 1021 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 C18orf8Q96DM3 657 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 Q96MF0 132 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 CYP2S1Q96SQ9 504 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 P2RY13Q9BPV8 354 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 SELENOOQ9BVL4 669 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 BBS2Q9BXC9 721 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 ACTRT3Q9BYD9 372 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 EBF3Q9H4W6 596 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 ECT2Q9H8V3 914 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 CASS4Q9NQ75 786 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 ASNSD1Q9NWL6 643 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 SYBUQ9NX95 663 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 KCTD5Q9NXV2 234 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 DONSONQ9NYP3 566 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 TESQ9UGI8 421 aaKnown RBP6.39□□□□□ -1.39
PTCD3-208ENST00000469585 SERTAD3Q9UJW9 196 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 SLC8A2Q9UPR5 921 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 CNTN6Q9UQ52 1028 aa6.39□□□□□ -1.39
PTCD3-208ENST00000469585 FAM92AA1XBS5 289 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 E5RJQ4 531 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 NEDD8-MDP1E9PL57 170 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 PPM1DO15297 605 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 IRAK2O43187 625 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 BEST1O76090 585 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 INMTO95050 263 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 PRAMEF12O95522 483 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ATP1A3P13637 1013 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF18P17022 549 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 AOC1P19801 751 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 CORO1AP31146 461 aaKnown RBP6.38□□□□□ -1.39
PTCD3-208ENST00000469585 CCR1P32246 355 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 NNMTP40261 264 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 EIF2DP41214 584 aaKnown RBP6.38□□□□□ -1.39
PTCD3-208ENST00000469585 HSPA7P48741 367 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF132P52740 706 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 CACNA2D1P54289 1103 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 STARD6P59095 220 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 DAOAP59103 153 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 BLOC1S1P78537 153 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 CDR2Q01850 454 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 PUM1Q14671 1186 aaKnown RBP eCLIP6.38□□□□□ -1.399e-7■□□□□ 9.3
PTCD3-208ENST00000469585 ZNF77Q15935 545 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 MPEG1Q2M385 716 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF750Q32MQ0 723 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 MPPE1Q53F39 396 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 RAB41Q5JT25 222 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 RABGAP1LQ5R372 815 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 SPECC1LQ69YQ0 1117 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 PM20D1Q6GTS8 502 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 PMF1Q6P1K2 205 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 DCUN1D2Q6PH85 259 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 LRRC31Q6UY01 552 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 PAQR9Q6ZVX9 377 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 TTC30AQ86WT1 665 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 CNGA4Q8IV77 575 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 Q8N1X5 172 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ZMIZ2Q8NF64 920 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 SLC35F5Q8WV83 523 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ATRIPQ8WXE1 791 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 TFAP2BQ92481 460 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ZFYVE19Q96K21 471 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 NCAPGQ9BPX3 1015 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 TPSD1Q9BZJ3 242 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 MRPL47Q9HD33 250 aaKnown RBP6.38□□□□□ -1.39
PTCD3-208ENST00000469585 SPHK2Q9NRA0 654 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 DDIT4Q9NX09 232 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 GTSE1Q9NYZ3 720 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 IL37Q9NZH6 218 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 ADAM22Q9P0K1 906 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 IFNKQ9P0W0 207 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 DEC1Q9P2X7 70 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 LCMT1Q9UIC8 334 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 PCDHGB2Q9Y5G2 931 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 WNT6Q9Y6F9 365 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 SCINQ9Y6U3 715 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 NUP210Q8TEM1 1887 aaPredicted RBP6.38□□□□□ -1.39
PTCD3-208ENST00000469585 MYO16Q9Y6X6 1858 aa6.38□□□□□ -1.39
PTCD3-208ENST00000469585 COL4A3Q01955 1670 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 SYNJ2BP-COX16A0A087WUM0 186 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 HHLA1C9JL84 531 aa6.37□□□□□ -1.39
PTCD3-208ENST00000469585 F5H5T6 163 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms