RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 USP9XQ93008 2570 aaPredicted RBP12.87□□□□□ -0.35
PTPN7-207ENST00000468385 PIPSLA2A3N6 862 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 PDZK1P1A8MUH7 402 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 VPS4BO75351 444 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 MTA2O94776 668 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 CCNYL3P0C7X3 344 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 ZNF7P17097 686 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-207ENST00000468385 GNLYP22749 145 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 DCDC1P59894 354 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 GBE1Q04446 702 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 SLC10A2Q12908 348 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-207ENST00000468385 GALNT3Q14435 633 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 CACHD1Q5VU97 1274 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 HGSNATQ68CP4 663 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 ABRAXAS1Q6UWZ7 409 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 LRRTM4Q86VH4 590 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 PPP1R3BQ86XI6 285 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 CPNE8Q86YQ8 564 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 ZNF547Q8IVP9 402 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 TRAM1L1Q8N609 369 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 GLYATL1Q969I3 302 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 RUFY1Q96T51 708 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 ZNF670Q9BS34 389 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 TIMM29Q9BSF4 260 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 ZSCAN5AQ9BUG6 496 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 NUP85Q9BW27 656 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 ZFYVE1Q9HBF4 777 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 SLC40A1Q9NP59 571 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 NFKBIL1Q9UBC1 381 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-207ENST00000468385 PLEKHB1Q9UF11 243 aaPredicted RBP12.86□□□□□ -0.35
PTPN7-207ENST00000468385 EPHA6Q9UF33 1036 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 VPS4AQ9UN37 437 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 DNAJC16Q9Y2G8 782 aa12.86□□□□□ -0.35
PTPN7-207ENST00000468385 TEX15Q9BXT5 2789 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 OR52A4PA6NMU1 304 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 C21orf140B9A014 251 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 KMOO15229 486 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 MTX2O75431 263 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 JCHAINP01591 159 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 MT-ND3P03897 115 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 CYP1A2P05177 515 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 NELFEP18615 380 aaKnown RBP12.85□□□□□ -0.35
PTPN7-207ENST00000468385 RPL10P27635 214 aaKnown RBP12.85□□□□□ -0.35
PTPN7-207ENST00000468385 CASP14P31944 242 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
PTPN7-207ENST00000468385 PPP1CAP62136 330 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 ZBTB17Q13105 803 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 GPR18Q14330 331 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 HADHQ16836 314 aaKnown RBP12.85□□□□□ -0.35
PTPN7-207ENST00000468385 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
PTPN7-207ENST00000468385 FAM182AQ5T1J6 154 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 FHL5Q5TD97 284 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 WASH2PQ6VEQ5 465 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 TMC3Q7Z5M5 1100 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 PQLC3Q8N755 202 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 CNTD1Q8N815 330 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 GALNT11Q8NCW6 608 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 CPT1CQ8TCG5 803 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 FAF2Q96CS3 445 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 HDAC11Q96DB2 347 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 ZDHHC12Q96GR4 267 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 TRIB3Q96RU7 358 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 ADGRE3Q9BY15 652 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 RAB33BQ9H082 229 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 ACTL8Q9H568 366 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 AKIRIN1Q9H9L7 192 aaPredicted RBP12.85□□□□□ -0.35
PTPN7-207ENST00000468385 WASH6PQ9NQA3 447 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 SEMA5BQ9P283 1151 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 SHOC2Q9UQ13 582 aa12.85□□□□□ -0.35
PTPN7-207ENST00000468385 UTP20O75691 2785 aaKnown RBP12.84□□□□□ -0.35
PTPN7-207ENST00000468385 TTLL8A6PVC2 850 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 MYO1FO00160 1098 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 KCNK1O00180 336 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 AGFG2O95081 481 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 PIRTP0C851 137 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 MX2P20592 715 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 GJC1P36383 396 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
PTPN7-207ENST00000468385 LAMB3Q13751 1172 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 UGT8Q16880 541 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 AGAP9Q5VTM2 703 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 CPZQ66K79 652 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 PWWP2BQ6NUJ5 590 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 C11orf96Q7Z7L8 435 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 RBM12BQ8IXT5 1001 aaKnown RBP12.84□□□□□ -0.35
PTPN7-207ENST00000468385 EFCAB3Q8N7B9 438 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 KCTD6Q8NC69 237 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 NAP1L5Q96NT1 182 aaPredicted RBP12.84□□□□□ -0.35
PTPN7-207ENST00000468385 PDE7BQ9NP56 450 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 TMPRSS11EQ9UL52 423 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 WDR37Q9Y2I8 494 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 ICE1Q9Y2F5 2266 aa12.84□□□□□ -0.35
PTPN7-207ENST00000468385 IGHV5-51A0A0C4DH38 117 aa12.83□□□□□ -0.36
PTPN7-207ENST00000468385 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
PTPN7-207ENST00000468385 VEGFDO43915 354 aa12.83□□□□□ -0.36
PTPN7-207ENST00000468385 CDK14O94921 469 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms