RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 ZCCHC2Q9C0B9 1178 aaKnown RBP18.83■□□□□ 0.6
COL7A1-207ENST00000467985 LACRTQ9GZZ8 138 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 OSGEPL1Q9H4B0 414 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 BPIFA1Q9NP55 256 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 PKP3Q9Y446 797 aa18.83■□□□□ 0.6
COL7A1-207ENST00000467985 MACROD2A1Z1Q3 448 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 K7ENP7 123 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 THRAP10827 490 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 ZNF7P17097 686 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-207ENST00000467985 VCLP18206 1134 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 CSF2RBP32927 897 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 CSTF2P33240 577 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL7A1-207ENST00000467985 SPAM1P38567 509 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 ETV5P41161 510 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 OTUD4Q01804 1114 aaKnown RBP18.82■□□□□ 0.6
COL7A1-207ENST00000467985 NFATC2Q13469 925 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 GTF2H3Q13889 308 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 ATP13A5Q4VNC0 1218 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 ZNF648Q5T619 568 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-207ENST00000467985 INO80CQ6PI98 192 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-207ENST00000467985 SYCE1Q8N0S2 351 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 UBL4BQ8N7F7 174 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 RCBTB1Q8NDN9 531 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 ACRBPQ8NEB7 543 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 GDAP1Q8TB36 358 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 BLOC1S5Q8TDH9 187 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 SLC39A7Q92504 469 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 WBP1Q96G27 269 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 PDLIM2Q96JY6 352 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 TTC25Q96NG3 672 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 TAAR9Q96RI9 348 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 UCK1Q9HA47 277 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 IL26Q9NPH9 171 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 IL17CQ9P0M4 197 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 PDP2Q9P2J9 529 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 CPNE7Q9UBL6 633 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 AAR2Q9Y312 384 aaKnown RBP18.82■□□□□ 0.6
COL7A1-207ENST00000467985 PCDHB11Q9Y5F2 797 aa18.82■□□□□ 0.6
COL7A1-207ENST00000467985 F5H423 210 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-207ENST00000467985 AGRPO00253 132 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 RBP3P10745 1247 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 XRCC1P18887 633 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-207ENST00000467985 CHRNA4P43681 627 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 EIF3EP60228 445 aaKnown RBP18.81■□□□□ 0.6
COL7A1-207ENST00000467985 CFHR1Q03591 330 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 KIF5AQ12840 1032 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 TMEM115Q12893 351 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-207ENST00000467985 ITGA9Q13797 1035 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 PRPSAP1Q14558 356 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 LDLRAP1Q5SW96 308 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 DARS2Q6PI48 645 aaKnown RBP18.81■□□□□ 0.6
COL7A1-207ENST00000467985 CRTC3Q6UUV7 619 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 ZNF761Q86XN6 746 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-207ENST00000467985 PRDM8Q9NQV8 689 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 AMFRQ9UKV5 643 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 PCDHGA3Q9Y5H0 932 aa18.81■□□□□ 0.6
COL7A1-207ENST00000467985 HELZ2Q9BYK8 2649 aaKnown RBP18.8■□□□□ 0.6
COL7A1-207ENST00000467985 GLYATL1P3A0A0U1RQE8 302 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 GRID2IPA4D2P6 1211 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 LILRA5A6NI73 299 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 MIF4GDA9UHW6 222 aaKnown RBP18.8■□□□□ 0.6
COL7A1-207ENST00000467985 C9orf172C9J069 976 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-207ENST00000467985 KCNJ13O60928 360 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 CCL4P13236 92 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 UBE2IP63279 158 aaKnown RBP18.8■□□□□ 0.6
COL7A1-207ENST00000467985 COL9A2Q14055 689 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-207ENST00000467985 PEX26Q7Z412 305 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 ALG3Q92685 438 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 LRRC45Q96CN5 670 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 ASPSCR1Q9BZE9 553 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 WDR70Q9NW82 654 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 FOXJ2Q9P0K8 574 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 SLC23A2Q9UGH3 650 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 TMPRSS11EQ9UL52 423 aa18.8■□□□□ 0.6
COL7A1-207ENST00000467985 GOLGA6L9A6NEM1 432 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 PRR19A6NJB7 356 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 C2orf81A6NN90 581 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 B4E171 279 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 STMND1H3BQB6 276 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 STX7O15400 261 aaKnown RBP18.79■□□□□ 0.6
COL7A1-207ENST00000467985 KCNN4O15554 427 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 MTX2O75431 263 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 AGTP01019 485 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 PYGMP11217 842 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 FGF3P11487 239 aaPredicted RBP18.79■□□□□ 0.6
COL7A1-207ENST00000467985 IDSP22304 550 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 TSPAN7P41732 249 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 RAB15P59190 212 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 PLA2G4EQ3MJ16 856 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 ANKRD20A2Q5SQ80 823 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 ANKRD20A1Q5TYW2 823 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 AGAP9Q5VTM2 703 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 ANKRD20A3Q5VUR7 823 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 FAM151BQ6UXP7 276 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 WASH2PQ6VEQ5 465 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 TRAPPC5Q8IUR0 188 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 ZNF547Q8IVP9 402 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 TRIM48Q8IWZ4 208 aa18.79■□□□□ 0.6
COL7A1-207ENST00000467985 RBM12BQ8IXT5 1001 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms