RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 DCLRE1AQ6PJP8 1040 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 B3GNT6Q6ZMB0 384 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 CCNI2Q6ZMN8 369 aaPredicted RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 Q6ZTC4 211 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 IKBIPQ70UQ0 350 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 NUP54Q7Z3B4 507 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 EGFL6Q8IUX8 553 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 TBC1D21Q8IYX1 336 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 DSELQ8IZU8 1212 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 ZCCHC9Q8N567 271 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 RFLNBQ8N5W9 214 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 KCNG4Q8TDN1 519 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 SCFD2Q8WU76 684 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 ZNF606Q8WXB4 792 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 FAM162AQ96A26 154 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 RBM18Q96H35 190 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 APOPT1Q96IL0 206 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 VPS39Q96JC1 886 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 CABS1Q96KC9 395 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 C3orf30Q96M34 536 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 KLHL15Q96M94 604 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 ZNF570Q96NI8 536 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 SLITRK1Q96PX8 696 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 HAUS8Q9BT25 410 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 THUMPD3Q9BV44 507 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 APOL6Q9BWW8 343 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 C1orf21Q9H246 121 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 CNGB3Q9NQW8 809 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 TXLNGQ9NUQ3 528 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 SMARCAL1Q9NZC9 954 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 MRPL15Q9P015 296 aaKnown RBP3.75□□□□□ -1.81
VPS50-209ENST00000467326 FBXL5Q9UKA1 691 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 CAMK2AQ9UQM7 478 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 TRIM17Q9Y577 477 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 STON1Q9Y6Q2 735 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 AP1M2Q9Y6Q5 423 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 FAM169AQ9Y6X4 670 aa3.75□□□□□ -1.81
VPS50-209ENST00000467326 TMEM202A6NGA9 273 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 FAM25EA8MYX2 175 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 SOCS6O14544 535 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 PLRG1O43660 514 aaKnown RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 STX6O43752 255 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 KRT86O43790 486 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 SEC22BO75396 215 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 RFPL2O75678 378 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 PGM3O95394 542 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 CLDN14O95500 239 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 GGPS1O95749 300 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 CCDC175P0C221 793 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 UBL4AP11441 157 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 MT3P25713 68 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 NFKBIAP25963 317 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 GP5P40197 560 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 ARL1P40616 181 aaPredicted RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 EIF2S3P41091 472 aaKnown RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 CAPZA2P47755 286 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 RPS3AP61247 264 aaKnown RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 KRT81Q14533 505 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 CRYMQ14894 314 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 SMU1Q2TAY7 513 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 HSP90AA5PQ58FG0 334 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 C9orf50Q5SZB4 431 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 FAM69AQ5T7M9 428 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 IRGCQ6NXR0 463 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 FAM122CQ6P4D5 195 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 OLFM4Q6UX06 510 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 MTSS1LQ765P7 747 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 LINGO2Q7L985 606 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 CHST3Q7LGC8 479 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 WDR63Q8IWG1 891 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 NAGSQ8N159 534 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 ZBTB2Q8N680 514 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 NFKBIDQ8NI38 313 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 CTCFLQ8NI51 663 aaPredicted RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 SPATA20Q8TB22 786 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 BRSK1Q8TDC3 778 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 ZFAND2BQ8WV99 257 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 KRT35Q92764 455 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 SIPA1Q96FS4 1042 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 PKP4Q99569 1192 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 KXD1Q9BQD3 176 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 TEX12Q9BXU0 123 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 MMADHCQ9H3L0 296 aaPredicted RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 MUC13Q9H3R2 512 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 THAP9Q9H5L6 903 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 ESRP2Q9H6T0 727 aaKnown RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 MKKSQ9NPJ1 570 aaPredicted RBP3.74□□□□□ -1.81
VPS50-209ENST00000467326 KCND2Q9NZV8 630 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 SARDHQ9UL12 918 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 A4GNTQ9UNA3 340 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 VDAC3Q9Y277 283 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 KLHL20Q9Y2M5 609 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 CCL27Q9Y4X3 112 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 PCDHAC2Q9Y5I4 1007 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 PIAS3Q9Y6X2 628 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 RUSC2Q8N2Y8 1516 aa3.74□□□□□ -1.81
VPS50-209ENST00000467326 ATXN2Q99700 1313 aaKnown RBP3.73□□□□□ -1.81
VPS50-209ENST00000467326 A0A0U1RQK1 487 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 ZNF320A2RRD8 509 aa3.73□□□□□ -1.81
VPS50-209ENST00000467326 ERICH4A6NGS2 130 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms