RNA–Protein interactions for RNA: ENST00000467307.1

USP30-204, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 3

Gene USP30, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-204ENST00000467307 SLC29A3Q9BZD2 475 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 RAB6CQ9H0N0 254 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 PCDHAC1Q9H158 963 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 TRIT1Q9H3H1 467 aaKnown RBP6.61□□□□□ -1.35
USP30-204ENST00000467307 TM9SF3Q9HD45 589 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 MID1IP1Q9NPA3 183 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 PRDM5Q9NQX1 630 aaPredicted RBP6.61□□□□□ -1.35
USP30-204ENST00000467307 CMTM6Q9NX76 183 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 SMPD4Q9NXE4 827 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 SAMD4AQ9UPU9 718 aaKnown RBP6.61□□□□□ -1.35
USP30-204ENST00000467307 CORO2BQ9UQ03 480 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 AURKCQ9UQB9 309 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 SCML2Q9UQR0 700 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 PIN4Q9Y237 131 aaKnown RBP6.61□□□□□ -1.35
USP30-204ENST00000467307 BTRCQ9Y297 605 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 IPPQ9Y573 584 aa6.61□□□□□ -1.35
USP30-204ENST00000467307 GPC6Q9Y625 555 aaPredicted RBP6.61□□□□□ -1.35
USP30-204ENST00000467307 SHROOM3Q8TF72 1996 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 C2orf81A6NN90 581 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 DRGXA6NNA5 263 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 FAM220BPB1ANY3 271 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 E9PAM4 449 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 H0Y626 953 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 PLK4O00444 970 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 NR5A2O00482 541 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 INPP4BO15327 924 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 DYNC1LI2O43237 492 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 RGS14O43566 566 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 TRIM16O95361 564 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ZBTB11O95625 1053 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 NDST3O95803 873 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 PTTG1O95997 202 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 HLA-DQB2P05538 268 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ALDOCP09972 364 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 TRAPPC2P0DI81 140 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 TRAPPC2BP0DI82 140 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 PRPS2P11908 318 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 COL6A1P12109 1028 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 MTHFD2P13995 350 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 CKMT2P17540 419 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 TCN1P20061 433 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 CAPN3P20807 821 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 RPS3P23396 243 aaKnown RBP eCLIP6.6□□□□□ -1.35
USP30-204ENST00000467307 VARSP26640 1264 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 EEF1DP29692 281 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 PTGER3P43115 390 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 MAPK8P45983 427 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 TMED10P49755 219 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 RGS4P49798 205 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ENTPD1P49961 510 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ST13P50502 369 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 GALK1P51570 392 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 SLC5A3P53794 718 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 CDH13P55290 713 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 C21orf58P58505 322 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 SH3BP2P78314 561 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 NKX3-2P78367 333 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 PURAQ00577 322 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 ZNF45Q02386 682 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 LIPEQ05469 1076 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 CTBP1Q13363 440 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 PMS2P3Q13401 168 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 EIF4HQ15056 248 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 TAF1AQ15573 450 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 FAM110CQ1W6H9 321 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ZNF181Q2M3W8 571 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 C6orf141Q5SZD1 244 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 UBXN11Q5T124 520 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 GLYATQ6IB77 296 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 KIAA1841Q6NSI8 718 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ZNF549Q6P9A3 640 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 CES3Q6UWW8 571 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 CYHR1Q6ZMK1 362 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 SAMD7Q7Z3H4 446 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 RETREG3Q86VR2 466 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 DENND6AQ8IWF6 608 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ZC3H7AQ8IWR0 971 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 CENPSQ8N2Z9 138 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 PTGR2Q8N8N7 351 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 ZMIZ2Q8NF64 920 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 C9orf43Q8TAL5 461 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 UBTD2Q8WUN7 234 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 TRAPPC12Q8WVT3 735 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 CYGBQ8WWM9 190 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 OVCA2Q8WZ82 227 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ABTB1Q969K4 478 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 ATXN7L3BQ96GX2 97 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 DNAJC1Q96KC8 554 aaKnown RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 FCRL2Q96LA5 508 aaPredicted RBP6.6□□□□□ -1.35
USP30-204ENST00000467307 C8orf48Q96LL4 319 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 MGME1Q9BQP7 344 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 ZCWPW1Q9H0M4 648 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 MAGEH1Q9H213 219 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 MMP27Q9H306 513 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 SP110Q9HB58 689 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 RDH14Q9HBH5 336 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 CATSPERZQ9NTU4 200 aa6.6□□□□□ -1.35
USP30-204ENST00000467307 NLE1Q9NVX2 485 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms