RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 KIAA0100Q14667 2235 aaKnown RBP11.32□□□□□ -0.6
HPS1-208ENST00000467246 PRRC2BQ5JSZ5 2229 aaKnown RBP11.32□□□□□ -0.6
HPS1-208ENST00000467246 LTBP2Q14767 1821 aa11.32□□□□□ -0.6
HPS1-208ENST00000467246 GOLGA8CPA6NN73 597 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 LEFTY2O00292 366 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 STX16O14662 325 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 MRASO14807 208 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 HTRA2O43464 458 aaPredicted RBP11.31□□□□□ -0.6
HPS1-208ENST00000467246 BNIP3LO60238 219 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 CRCPO75575 148 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 BCAS2O75934 225 aaPredicted RBP11.31□□□□□ -0.6
HPS1-208ENST00000467246 CXCL14O95715 111 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 FESP07332 822 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 HGFP14210 728 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 PPM1AP35813 382 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 CCR2P41597 374 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 STX1BP61266 288 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 RALGDSQ12967 914 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 TGFBIQ15582 683 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 C18orf21Q32NC0 220 aaPredicted RBP11.31□□□□□ -0.6
HPS1-208ENST00000467246 PDSS2Q86YH6 399 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 CPXM2Q8N436 756 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 FIBINQ8TAL6 211 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 VOPP1Q96AW1 172 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 KLHL32Q96NJ5 620 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 ACOX2Q99424 681 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 CIPCQ9C0C6 399 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 KLHL4Q9C0H6 718 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 EBF3Q9H4W6 596 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 ABCB8Q9NUT2 735 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 HCFC1R1Q9NWW0 138 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 KIAA1522Q9P206 1035 aaPredicted RBP11.31□□□□□ -0.6
HPS1-208ENST00000467246 MAFFQ9ULX9 164 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 PSMD13Q9UNM6 376 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 PRSS21Q9Y6M0 314 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 TRAV19A0A0A6YYK7 116 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 PRORSD1PA6NEY8 169 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 TRIM38O00635 465 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 LIN7AO14910 233 aaPredicted RBP11.31□□□□□ -0.6
HPS1-208ENST00000467246 SNX2O60749 519 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 LINC00271P0C7V0 271 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 ACADVLP49748 655 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 ATP4BP51164 291 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 CDKN3Q16667 212 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 TSPAN33Q86UF1 283 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 STK40Q8N2I9 435 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 PQLC1Q8N2U9 271 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 KLHL23Q8NBE8 558 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 LKAAEAR1Q8TD35 194 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 LRCH3Q96II8 777 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 C17orf80Q9BSJ5 609 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 C1QTNF3Q9BXJ4 246 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 DHRS7Q9Y394 339 aa11.31□□□□□ -0.6
HPS1-208ENST00000467246 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.3□□□□□ -0.6
HPS1-208ENST00000467246 E2F3O00716 465 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 CCL16O15467 120 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 ESRRBO95718 433 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 BPIP17213 487 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 DIO3P55073 304 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 AQP4P55087 323 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 MRPS35P82673 323 aaKnown RBP11.3□□□□□ -0.6
HPS1-208ENST00000467246 NFATC2Q13469 925 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 RBBP7Q16576 425 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 MPP7Q5T2T1 576 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 PTRHD1Q6GMV3 140 aaKnown RBP11.3□□□□□ -0.6
HPS1-208ENST00000467246 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 CDK15Q96Q40 435 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 SARDHQ9UL12 918 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 COMMD10Q9Y6G5 202 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 hCG_2014768A0A024R1R8 64 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 NR5A2O00482 541 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 CASQ2O14958 399 aaPredicted RBP11.3□□□□□ -0.6
HPS1-208ENST00000467246 LBPP18428 481 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 HLA-FP30511 346 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 VPS26BQ4G0F5 336 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 PITRM1Q5JRX3 1037 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 TXNDC11Q6PKC3 985 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 CERS6Q6ZMG9 384 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 MIER2Q8N344 545 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 OR2AP1Q8NGE2 309 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 OR52B6Q8NGF0 335 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 B4GALNT2Q8NHY0 566 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 GATA6Q92908 595 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 CLPBQ9H078 707 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 ATP13A3Q9H7F0 1226 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 IL1RL2Q9HB29 575 aa11.3□□□□□ -0.6
HPS1-208ENST00000467246 GMPR2Q9P2T1 348 aaKnown RBP11.3□□□□□ -0.6
HPS1-208ENST00000467246 NPIPB15A6NHN6 443 aaPredicted RBP11.29□□□□□ -0.6
HPS1-208ENST00000467246 TRIM24O15164 1050 aa11.29□□□□□ -0.6
HPS1-208ENST00000467246 AHCYL1O43865 530 aa11.29□□□□□ -0.6
HPS1-208ENST00000467246 OR4F21O95013 312 aa11.29□□□□□ -0.6
HPS1-208ENST00000467246 SRCP12931 536 aa11.29□□□□□ -0.6
HPS1-208ENST00000467246 ZNF7P17097 686 aaPredicted RBP11.29□□□□□ -0.6
HPS1-208ENST00000467246 CAPN3P20807 821 aa11.29□□□□□ -0.6
HPS1-208ENST00000467246 PSMD8P48556 350 aa11.29□□□□□ -0.6
HPS1-208ENST00000467246 RPL26P61254 145 aaKnown RBP11.29□□□□□ -0.6
HPS1-208ENST00000467246 TRIM25Q14258 630 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms