RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 ARNTP27540 789 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 CD40LGP29965 261 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 SKIV2LQ15477 1246 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 HIST2H2ACQ16777 129 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 CDONQ4KMG0 1287 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 RBM48Q5RL73 367 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 NAPEPLDQ6IQ20 393 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 DENND5AQ6IQ26 1287 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ADCK1Q86TW2 530 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 RNF135Q8IUD6 432 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 FSTL5Q8N475 847 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 NATD1Q8N6N6 113 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 LEMD2Q8NC56 503 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 NXNL1Q96CM4 212 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 DACH2Q96NX9 599 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 TBL1YQ9BQ87 522 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ACBD6Q9BR61 282 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ING2Q9H160 280 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ZDHHC2Q9UIJ5 367 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ZNF221Q9UK13 617 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 FIS1Q9Y3D6 152 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 NEMP2A6NFY4 417 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 UNCXA6NJT0 531 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 HLA-DQB2P05538 268 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ADARB1P78563 741 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 CBX2Q14781 532 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 DDR2Q16832 855 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ZNF789Q5FWF6 425 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ZCCHC8Q6NZY4 707 aaKnown RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 FKBP9P1Q75LS8 142 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 METTL23Q86XA0 190 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 CENPLQ8N0S6 344 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 CCNYL1Q8N7R7 359 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 OR7A2PQ8NGA2 310 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 CCDC177Q9NQR7 707 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 OXSMQ9NWU1 459 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 ABI2Q9NYB9 513 aaPredicted RBP17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 VWA7Q9Y334 891 aa17.91■□□□□ 0.46
SNAPC3-205ENST00000467062 SLC13A2Q13183 592 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 SCD5Q86SK9 330 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 SPARTQ8N0X7 666 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 ISL2Q96A47 359 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 KLHL5Q96PQ7 755 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 MCMBPQ9BTE3 642 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 C1QTNF1Q9BXJ1 281 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 IRF2BPLQ9H1B7 796 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 TRMT13Q9NUP7 481 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 BAG5Q9UL15 447 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 GABRQQ9UN88 632 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 MTF2Q9Y483 593 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 A0A1W2PQH9 124 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 MAGEB16A2A368 324 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 ERI2A8K979 691 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 IRAK2O43187 625 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 MTSS1O43312 755 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 DUSP11O75319 330 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 TBX18O95935 607 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 MPOP05164 745 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 ATP6V1B2P21281 511 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 HTR1BP28222 390 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 ELK4P28324 431 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 FKBP1BP68106 108 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 MRPS15P82914 257 aaKnown RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 CDK10Q15131 360 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 SLC39A12Q504Y0 691 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 FAM45BPQ6NSW5 357 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 PKN3Q6P5Z2 889 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 LDB1Q86U70 411 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 SERINC5Q86VE9 423 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 ZNF280BQ86YH2 543 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 REM2Q8IYK8 340 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 GRPEL2Q8TAA5 225 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 FAM110BQ8TC76 370 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 FAM45AQ8TCE6 357 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 FIG4Q92562 907 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 KIFC1Q9BW19 673 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 RUBCNLQ9H714 662 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 XPR1Q9UBH6 696 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 ADAM28Q9UKQ2 775 aa17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 ARIH1Q9Y4X5 557 aaPredicted RBP17.9■□□□□ 0.46
SNAPC3-205ENST00000467062 GPR182O15218 404 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 MFN2O95140 757 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 ALBP02768 609 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 GRK4P32298 578 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 RPL9P32969 192 aaKnown RBP17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 ALDH7A1P49419 539 aaKnown RBP17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 PPP2R2BQ00005 443 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 ITKQ08881 620 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 CTF1Q16619 201 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 SMU1Q2TAY7 513 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 ANO4Q32M45 955 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 IL31Q6EBC2 164 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 KIAA1841Q6NSI8 718 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 CMTR2Q8IYT2 770 aaKnown RBP17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 PSMA8Q8TAA3 256 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 MAGEE2Q8TD90 523 aaPredicted RBP17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 GPR22Q99680 433 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 FSD1LQ9BXM9 530 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 C12orf10Q9HB07 376 aa17.89■□□□□ 0.46
SNAPC3-205ENST00000467062 GLOD4Q9HC38 313 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms