RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 D2HGDHQ8N465 521 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 SHC3Q92529 594 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 DHX58Q96C10 678 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 INTS4Q96HW7 963 aaKnown RBP12.33□□□□□ -0.44
UBR4-210ENST00000466969 LMF1Q96S06 567 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 SECISBP2Q96T21 854 aaKnown RBP12.33□□□□□ -0.44
UBR4-210ENST00000466969 LHPPQ9H008 270 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 BLZF1Q9H2G9 400 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 NEUROD4Q9HD90 331 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 B4GALT6Q9UBX8 382 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 HCFC1P51610 2035 aa12.33□□□□□ -0.44
UBR4-210ENST00000466969 SONP18583 2426 aaKnown RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 CHD3Q12873 2000 aaKnown RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 FAM237BA0A1B0GVD1 139 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 UBA6A0AVT1 1052 aaPredicted RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 SOCS6O14544 535 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 ATMINO43313 823 aaPredicted RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 KCNAB3O43448 404 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 RAF1P04049 648 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 CD63P08962 238 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 CYP2A7P20853 494 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 CASP1P29466 404 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 PPP1CAP62136 330 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 IRX6P78412 446 aaPredicted RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 DEUP1Q05D60 604 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 ADCY2Q08462 1091 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 KEAP1Q14145 624 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 CNGA3Q16281 694 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 RWDD4Q6NW29 188 aaKnown RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 Q6ZPB1 254 aaPredicted RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 B4GALNT4Q76KP1 1039 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 PPP1R32Q7Z5V6 425 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 PHLDB2Q86SQ0 1253 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 ARMC2Q8NEN0 867 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 TEKT4Q8WW24 435 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 PTERQ96BW5 349 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 MAP3K3Q99759 626 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 GPATCH1Q9BRR8 931 aaKnown RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 C1GALT1Q9NS00 363 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 IL17CQ9P0M4 197 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 STAP1Q9ULZ2 295 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 PPT2Q9UMR5 302 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 ZNF835Q9Y2P0 537 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 LUC7L2Q9Y383 392 aaKnown RBP12.32□□□□□ -0.44
UBR4-210ENST00000466969 PCM1Q15154 2024 aa12.32□□□□□ -0.44
UBR4-210ENST00000466969 SPTBP11277 2137 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 NKX2-6A6NCS4 301 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 E9PLN8 166 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 SMAD7O15105 426 aaKnown RBP12.31□□□□□ -0.44
UBR4-210ENST00000466969 DAB1O75553 588 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 ZNF202O95125 648 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 SLC19A1P41440 591 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 SULT1E1P49888 294 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 NKX6-1P78426 367 aaPredicted RBP12.31□□□□□ -0.44
UBR4-210ENST00000466969 BCL2L1Q07817 233 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 STK4Q13043 487 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 E2F4Q16254 413 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 PAMR1Q6UXH9 720 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 ADAMTSL4Q6UY14 1074 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 KIAA0895Q8NCT3 520 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 VKORC1Q9BQB6 163 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 SGPP1Q9BX95 441 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 RNF32Q9H0A6 362 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 OSGEPL1Q9H4B0 414 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 RETREG1Q9H6L5 497 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 SLC6A20Q9NP91 592 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 KCNJ16Q9NPI9 418 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 POT1Q9NUX5 634 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 TMEM51Q9NW97 253 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 TRPS1Q9UHF7 1281 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 FBXL4Q9UKA2 621 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 TRAF3IP3Q9Y228 551 aa12.31□□□□□ -0.44
UBR4-210ENST00000466969 CCDC66A2RUB6 948 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 FAM90A27PA6NNH2 459 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 IDSB3KWA1 339 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 H7C1Q1 480 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 ALOX12BO75342 701 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 IDSP22304 550 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 RPL13P26373 211 aaKnown RBP12.3□□□□□ -0.44
UBR4-210ENST00000466969 TNFSF10P50591 281 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 DPTQ07507 201 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 ABRQ12979 859 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 PDCLQ13371 301 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 SYCP1Q15431 976 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 CYTH1Q15438 398 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 DNTTIP2Q5QJE6 756 aaKnown RBP12.3□□□□□ -0.44
UBR4-210ENST00000466969 ARTNQ5T4W7 220 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 OTUD1Q5VV17 481 aaPredicted RBP12.3□□□□□ -0.44
UBR4-210ENST00000466969 KLHL35Q6PF15 583 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 Q6ZVL8 140 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 RBM12BQ8IXT5 1001 aaKnown RBP12.3□□□□□ -0.44
UBR4-210ENST00000466969 CLYBLQ8N0X4 340 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 IQUBQ8NA54 791 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 OR2Y1Q8NGV0 311 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 AGAP11Q8TF27 550 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 ASB5Q8WWX0 329 aa12.3□□□□□ -0.44
UBR4-210ENST00000466969 ECHDC3Q96DC8 303 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms