RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 NCKIPSDQ9NZQ3 722 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 VPS18Q9P253 973 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 RAB21Q9UL25 225 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 TMPRSS11EQ9UL52 423 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 ATXN7L1Q9ULK2 861 aaPredicted RBP9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 SAR1BQ9Y6B6 198 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 AK5Q9Y6K8 562 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 RNF215Q9Y6U7 377 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 PIKFYVEQ9Y2I7 2098 aa9.63□□□□□ -0.87
RTFDC1-205ENST00000466260 OR2AG2A6NM03 316 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 NUAK1O60285 661 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 ZNF189O75820 626 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CDK14O94921 469 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 PRAMEF1O95521 474 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CRTAMO95727 393 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 AP2A1O95782 977 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 EML2O95834 649 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 PROS1P07225 676 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 GP1BAP07359 652 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CDK4P11802 303 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 TCP1P17987 556 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CCL7P80098 99 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CYP4F3Q08477 520 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 HLTFQ14527 1009 aaKnown RBP eCLIP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 TRIP13Q15645 432 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 AMZ1Q400G9 498 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CCDC38Q502W7 563 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 C3orf38Q5JPI3 329 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 PAPD7Q5XG87 772 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 PDPK2PQ6A1A2 396 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 WDR93Q6P2C0 686 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 RANBP10Q6VN20 620 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 LRRTM4Q86VH4 590 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 RAVER1Q8IY67 606 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 NAGSQ8N159 534 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 MAIP1Q8WWC4 291 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 DNAJC1Q96KC8 554 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 PPP1R2P1Q96PQ5 205 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 DEPDC7Q96QD5 511 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 AP1M1Q9BXS5 423 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 FRMD8P1Q9BZ68 369 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CCDC86Q9H6F5 360 aaKnown RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 ASB8Q9H765 288 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 TRIM39Q9HCM9 518 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 IL26Q9NPH9 171 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 KLC4Q9NSK0 619 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 NFKBIL1Q9UBC1 381 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 CRLS1Q9UJA2 301 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 ZMIZ1Q9ULJ6 1067 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 TTC7AQ9ULT0 858 aaPredicted RBP9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 JRKLQ9Y4A0 524 aa9.62□□□□□ -0.87
RTFDC1-205ENST00000466260 RHPN2P1A8MT19 583 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 PDZK1P1A8MUH7 402 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 PSMD3O43242 534 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 MPOP05164 745 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 APRTP07741 180 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 PRSS56P0CW18 603 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 MSH3P20585 1137 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 ALDH4A1P30038 563 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 STIP1P31948 543 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 MC4RP32245 332 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 RPL22P35268 128 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 FDFT1P37268 417 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 GRIA1P42261 906 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 MAPK9P45984 424 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 TMEM115Q12893 351 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 NFATC2Q13469 925 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 ITGA9Q13797 1035 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 CCNG2Q16589 344 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 HSP90B2PQ58FF3 399 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 ZRANB3Q5FWF4 1079 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 GPRC6AQ5T6X5 926 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 ZDHHC20Q5W0Z9 365 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 KCTD11Q693B1 232 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 DENND5AQ6IQ26 1287 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 RBM44Q6ZP01 1051 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 CCNJLQ8IV13 435 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 ARL14Q8N4G2 192 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 BEND7Q8N7W2 519 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 ZNF398Q8TD17 642 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 BRSK1Q8TDC3 778 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 SLC37A2Q8TED4 501 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 RTP4Q96DX8 246 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 SCARF2Q96GP6 870 aaPredicted RBP9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 VPS35Q96QK1 796 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 GFM1Q96RP9 751 aaKnown RBP9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 FOXP3Q9BZS1 431 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 LRRN3Q9H3W5 708 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 VIPAS39Q9H9C1 493 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 RDH14Q9HBH5 336 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 EPB41L5Q9HCM4 733 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 PAK5Q9P286 719 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 TBC1D29Q9UFV1 150 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 SLC30A1Q9Y6M5 507 aa9.61□□□□□ -0.87
RTFDC1-205ENST00000466260 A0A1W2PQM1 296 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 FAM221BA6H8Z2 402 aa9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 BHMG1C9JSJ3 638 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 GAPDHSO14556 408 aaPredicted RBP9.6□□□□□ -0.87
RTFDC1-205ENST00000466260 ZNF185O15231 689 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms