RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 IRF1P10914 325 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 AGAP20933 346 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ICAM3P32942 547 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ABCD1P33897 745 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 GNAQP50148 359 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 NAP1L1P55209 391 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 EIF3BP55884 814 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ARF3P61204 181 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 MRPS5P82675 430 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ARF1P84077 181 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 FOXM1Q08050 763 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 TMEM115Q12893 351 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 PDE1CQ14123 709 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 FRG1Q14331 258 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 HIST2H2ACQ16777 129 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 FAM53AQ6NSI3 398 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ANKRD54Q6NXT1 300 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 MZT2BQ6NZ67 158 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 CDC73Q6P1J9 531 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 CFAP161Q6P656 301 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 TRIM65Q6PJ69 517 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 RBMS3Q6XE24 437 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 PLEKHM3Q6ZWE6 761 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 IKBIPQ70UQ0 350 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 SLC46A3Q7Z3Q1 461 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 NOXA1Q86UR1 476 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 TDRPQ86YL5 185 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 SPATA6LQ8N4H0 392 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 NGEFQ8N5V2 710 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 C11orf65Q8NCR3 313 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 OR52I2Q8NH67 350 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 SMARCE1Q969G3 411 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 PERPQ96FX8 193 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 TIGD1Q96MW7 591 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 RBM4BQ9BQ04 359 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 BRF2Q9HAW0 419 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 DDX4Q9NQI0 724 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 CCDC177Q9NQR7 707 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 DIAPH3Q9NSV4 1193 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 C20orf141Q9NUB4 165 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 SEPT11Q9NVA2 429 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 HAUS2Q9NVX0 235 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 ADPRHL2Q9NX46 363 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 MPP6Q9NZW5 540 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 SWAP70Q9UH65 585 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 MKLN1Q9UL63 735 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 CORO1CQ9ULV4 474 aaPredicted RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 MRPS28Q9Y2Q9 187 aaKnown RBP2.07□□□□□ -2.08
CCDC93-205ENST00000466171 PTPRCP08575 1304 aa2.07□□□□□ -2.08
CCDC93-205ENST00000466171 CTAGE9A4FU28 777 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 A6NCN8 305 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 PTGES3LE9PB15 166 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 LDLRAD4O15165 306 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 CTSVO60911 334 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 PTP4A3O75365 173 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 CLEC3BP05452 202 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 CTAGE8P0CG41 777 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 ACADMP11310 421 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 RARGP13631 454 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 AHRP35869 848 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 CPOXP36551 454 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 PBX3P40426 434 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 NR2C2P49116 596 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 CLNS1AP54105 237 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 MLLT10P55197 1068 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 RPL7AP62424 266 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 RPL24P83731 157 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 PLIN5Q00G26 463 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 MAMLD1Q13495 774 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 EIF4A2Q14240 407 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 TMEM187Q14656 261 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 TOMM20Q15388 145 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 GSTA3Q16772 222 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 TECRLQ5HYJ1 363 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 SNX30Q5VWJ9 437 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 FAM205BPQ63HN1 556 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 INO80CQ6PI98 192 aaPredicted RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 PXKQ7Z7A4 578 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 PCGF5Q86SE9 256 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 DHX40Q8IX18 779 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 CTAGE4Q8IX94 777 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 ZBTB2Q8N680 514 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 FRMD1Q8N878 549 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 OR2AK2Q8NG84 335 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 ZNF473Q8WTR7 871 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 USP6NLQ92738 828 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 INTS12Q96CB8 462 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 ARHGEF26Q96DR7 871 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 WDFY2Q96P53 400 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 NR1H4Q96RI1 486 aaPredicted RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 VGLL1Q99990 258 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 ITPAQ9BY32 194 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 GLIS2Q9BZE0 524 aaPredicted RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 GHITMQ9H3K2 345 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 PPP1R3EQ9H7J1 279 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 HINT3Q9NQE9 182 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 BARHL2Q9NY43 387 aa2.06□□□□□ -2.08
CCDC93-205ENST00000466171 LIMA1Q9UHB6 759 aaKnown RBP2.06□□□□□ -2.08
CCDC93-205ENST00000466171 ZNF215Q9UL58 517 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms