RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 STRA8Q7Z7C7 330 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 ZC3HC1Q86WB0 502 aaKnown RBP11.01□□□□□ -0.65
VCP-204ENST00000466100 ZNF547Q8IVP9 402 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 CTAGE3PQ8IX95 158 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 RASGEF1AQ8N9B8 481 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 OR2W6PQ8NHA6 318 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 GABPB2Q8TAK5 448 aaPredicted RBP11.01□□□□□ -0.65
VCP-204ENST00000466100 NAT14Q8WUY8 206 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 HEXDCQ8WVB3 486 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 WDR92Q96MX6 357 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 RBBP8Q99708 897 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 TMEM109Q9BVC6 243 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 MIR1-1HGQ9H1L0 117 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 OR2AG1Q9H205 316 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 RHOJQ9H4E5 214 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 AASDHPPTQ9NRN7 309 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 TMEM74BQ9NUR3 256 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 ATXN10Q9UBB4 475 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 ZNF180Q9UJW8 692 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 VPS9D1Q9Y2B5 631 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 MED16Q9Y2X0 877 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 TMEM98Q9Y2Y6 226 aa11.01□□□□□ -0.65
VCP-204ENST00000466100 ARID1BQ8NFD5 2236 aaPredicted RBP11.01□□□□□ -0.65
VCP-204ENST00000466100 EP300Q09472 2414 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 SPTY2D1-AS1A0A0U1RR47 76 aa11□□□□□ -0.65
VCP-204ENST00000466100 A0A1B0GTW7 788 aa11□□□□□ -0.65
VCP-204ENST00000466100 GPR89AB7ZAQ6 455 aa11□□□□□ -0.65
VCP-204ENST00000466100 TLR4O00206 839 aa11□□□□□ -0.65
VCP-204ENST00000466100 CACNB4O00305 520 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 TNFRSF10CO14798 259 aa11□□□□□ -0.65
VCP-204ENST00000466100 VILLO15195 856 aa11□□□□□ -0.65
VCP-204ENST00000466100 NUAK1O60285 661 aa11□□□□□ -0.65
VCP-204ENST00000466100 AP2A2O94973 939 aa11□□□□□ -0.65
VCP-204ENST00000466100 EPN2O95208 641 aa11□□□□□ -0.65
VCP-204ENST00000466100 IVLP07476 585 aa11□□□□□ -0.65
VCP-204ENST00000466100 GPR89BP0CG08 455 aa11□□□□□ -0.65
VCP-204ENST00000466100 ATP1B2P14415 290 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 ZNF7P17097 686 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 MSH3P20585 1137 aa11□□□□□ -0.65
VCP-204ENST00000466100 PPARGP37231 505 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 POLD2P49005 469 aa11□□□□□ -0.65
VCP-204ENST00000466100 PRLHRP49683 370 aa11□□□□□ -0.65
VCP-204ENST00000466100 AFF3P51826 1226 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 LIMK2P53671 638 aa11□□□□□ -0.65
VCP-204ENST00000466100 NXPH1P58417 271 aa11□□□□□ -0.65
VCP-204ENST00000466100 TIAL1Q01085 375 aaKnown RBP eCLIP11□□□□□ -0.65
VCP-204ENST00000466100 BNC1Q01954 994 aa11□□□□□ -0.65
VCP-204ENST00000466100 EIF2B5Q13144 721 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 CASP8Q14790 479 aa11□□□□□ -0.65
VCP-204ENST00000466100 RASA2Q15283 850 aa11□□□□□ -0.65
VCP-204ENST00000466100 ZNF658BQ4V348 819 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 BCL7AQ4VC05 210 aa11□□□□□ -0.65
VCP-204ENST00000466100 RBM20Q5T481 1227 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 ZC3H14Q6PJT7 736 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
VCP-204ENST00000466100 XKR5Q6UX68 686 aa11□□□□□ -0.65
VCP-204ENST00000466100 C11orf96Q7Z7L8 435 aa11□□□□□ -0.65
VCP-204ENST00000466100 SPATS2Q86XZ4 545 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 TDRPQ86YL5 185 aa11□□□□□ -0.65
VCP-204ENST00000466100 DCP2Q8IU60 420 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 SYT12Q8IV01 421 aa11□□□□□ -0.65
VCP-204ENST00000466100 RGL4Q8IZJ4 473 aa11□□□□□ -0.65
VCP-204ENST00000466100 CLDN19Q8N6F1 224 aa11□□□□□ -0.65
VCP-204ENST00000466100 ACVR1CQ8NER5 493 aa11□□□□□ -0.65
VCP-204ENST00000466100 GDAP1Q8TB36 358 aa11□□□□□ -0.65
VCP-204ENST00000466100 LKAAEAR1Q8TD35 194 aa11□□□□□ -0.65
VCP-204ENST00000466100 EPS8L3Q8TE67 593 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 OR1E3Q8WZA6 343 aa11□□□□□ -0.65
VCP-204ENST00000466100 KLHDC7BQ96G42 594 aa11□□□□□ -0.65
VCP-204ENST00000466100 PDXPQ96GD0 296 aa11□□□□□ -0.65
VCP-204ENST00000466100 LOXL4Q96JB6 756 aa11□□□□□ -0.65
VCP-204ENST00000466100 ZIM3Q96PE6 472 aa11□□□□□ -0.65
VCP-204ENST00000466100 TTC1Q99614 292 aa11□□□□□ -0.65
VCP-204ENST00000466100 ZCCHC2Q9C0B9 1178 aaKnown RBP11□□□□□ -0.65
VCP-204ENST00000466100 CLPBQ9H078 707 aa11□□□□□ -0.65
VCP-204ENST00000466100 SLC24A2Q9UI40 661 aa11□□□□□ -0.65
VCP-204ENST00000466100 CORO1CQ9ULV4 474 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 PLAAQ9Y263 795 aa11□□□□□ -0.65
VCP-204ENST00000466100 CRYL1Q9Y2S2 319 aa11□□□□□ -0.65
VCP-204ENST00000466100 ZFHX2Q9C0A1 2572 aaPredicted RBP11□□□□□ -0.65
VCP-204ENST00000466100 UBA6A0AVT1 1052 aaPredicted RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 PRSS38A1L453 326 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 PRR19A6NJB7 356 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 CFAP99D6REC4 459 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 POC1B-GALNT4F8VUJ3 575 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 PFDN6O15212 129 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 CDK14O94921 469 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 ESR1P03372 595 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 PKMP14618 531 aaKnown RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 KELP23276 732 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 AKT1P31749 480 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 DPP6P42658 865 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 CSNK1EP49674 416 aaKnown RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 CSRP3P50461 194 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 THOP1P52888 689 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 EIF3BP55884 814 aaKnown RBP10.99□□□□□ -0.65
VCP-204ENST00000466100 ZNF844Q08AG5 666 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 ALG11Q2TAA5 492 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 GRTP1Q5TC63 336 aa10.99□□□□□ -0.65
VCP-204ENST00000466100 DOK6Q6PKX4 331 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms