RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 LRRTM4Q86VH4 590 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 UBL4BQ8N7F7 174 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 SLC38A3Q99624 504 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 OSGEPL1Q9H4B0 414 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 DNAJC16Q9Y2G8 782 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 SDK2Q58EX2 2172 aa21.47■■□□□ 1.03
LIME1-203ENST00000465591 SMG1Q96Q15 3661 aaKnown RBP21.47■■□□□ 1.03
LIME1-203ENST00000465591 ATRXP46100 2492 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 GLYATL1P3A0A0U1RQE8 302 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 KMOO15229 486 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 CXADRP78310 365 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 TMEM115Q12893 351 aaPredicted RBP21.46■■□□□ 1.03
LIME1-203ENST00000465591 SPARCL1Q14515 664 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 INSCQ1MX18 579 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 DENND5AQ6IQ26 1287 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 MICALCLQ6ZW33 695 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 KLHDC8BQ8IXV7 354 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 OR4D9Q8NGE8 314 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 DTX3LQ8TDB6 740 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 CMKLR1Q99788 373 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 DPH1Q9BZG8 443 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 FOXJ2Q9P0K8 574 aa21.46■■□□□ 1.03
LIME1-203ENST00000465591 PRAMEF33A0A0G2JMD5 474 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 C9orf172C9J069 976 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 PRAMEF10O60809 474 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 THRAP10827 490 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 CTSCP53634 463 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 MAPK10P53779 464 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 GDF10P55107 478 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 UBE2IP63279 158 aaKnown RBP21.45■■□□□ 1.02
LIME1-203ENST00000465591 GPLD1P80108 840 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 TGIF1Q15583 401 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 TXLNBQ8N3L3 684 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 RASGEF1AQ8N9B8 481 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 FAM71DQ8N9W8 422 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 GDAP1Q8TB36 358 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 SLC35B2Q8TB61 432 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 USP7Q93009 1102 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 PMEPA1Q969W9 287 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 TMEM159Q96B96 161 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 FERMT1Q9BQL6 677 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 TIMM29Q9BSF4 260 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 ZNF624Q9P2J8 865 aaPredicted RBP21.45■■□□□ 1.02
LIME1-203ENST00000465591 CPNE7Q9UBL6 633 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 AAR2Q9Y312 384 aaKnown RBP21.45■■□□□ 1.02
LIME1-203ENST00000465591 PKP3Q9Y446 797 aa21.45■■□□□ 1.02
LIME1-203ENST00000465591 KIR2DS5A0A0G2JLQ3 304 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 A0A0G2JNG1 304 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 C5orf60A6NFR6 353 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 KIR2DS3K7RE56 304 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 NVLO15381 856 aaKnown RBP21.44■■□□□ 1.02
LIME1-203ENST00000465591 STX7O15400 261 aaKnown RBP21.44■■□□□ 1.02
LIME1-203ENST00000465591 ZW10O43264 779 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 STK10O94804 968 aaKnown RBP21.44■■□□□ 1.02
LIME1-203ENST00000465591 METTL18O95568 372 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 BRAFP15056 766 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 PRPSAP1Q14558 356 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 KIR2DS5Q14953 304 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 TAF1AQ15573 450 aaPredicted RBP21.44■■□□□ 1.02
LIME1-203ENST00000465591 SEPT7Q16181 437 aaKnown RBP21.44■■□□□ 1.02
LIME1-203ENST00000465591 GPRC6AQ5T6X5 926 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 ZDHHC20Q5W0Z9 365 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 SLC9B2Q86UD5 537 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 TRAPPC5Q8IUR0 188 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 DDHD1Q8NEL9 900 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 OR4K2Q8NGD2 314 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 NAT14Q8WUY8 206 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 TBC1D10AQ9BXI6 508 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 FKBPLQ9UIM3 349 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 ACSL6Q9UKU0 697 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 GUCA1BQ9UMX6 200 aa21.44■■□□□ 1.02
LIME1-203ENST00000465591 HGSO14964 777 aaPredicted RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 FGF3P11487 239 aaPredicted RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 LPOP22079 712 aaPredicted RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 RPL10P27635 214 aaKnown RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 SLC19A1P41440 591 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 ARSDP51689 593 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 DRG2P55039 364 aaKnown RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 SRSF6Q13247 344 aaKnown RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 BROXQ5VW32 411 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 KCTD11Q693B1 232 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 TMEM71Q6P5X7 295 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 GPR155Q7Z3F1 870 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 RNF10Q8N5U6 811 aaKnown RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 TTC13Q8NBP0 860 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 OR13C4Q8NGS5 318 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 OR10G6Q8NH81 332 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 ATG4AQ8WYN0 398 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 CCDC97Q96F63 343 aaPredicted RBP21.43■■□□□ 1.02
LIME1-203ENST00000465591 TBL1YQ9BQ87 522 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 PDP2Q9P2J9 529 aa21.43■■□□□ 1.02
LIME1-203ENST00000465591 GOLGA6L9A6NEM1 432 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 OR5K4A6NMS3 321 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 DUX1O43812 170 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 PPFIA2O75334 1257 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 PTMAP06454 111 aaKnown RBP21.42■■□□□ 1.02
LIME1-203ENST00000465591 SLC2A4P14672 509 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 MAPK9P45984 424 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 TMPRSS3P57727 454 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 XIAPP98170 497 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms