RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 METAP1P53582 386 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 PDE1BQ01064 536 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 CDK18Q07002 472 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 OLIG2Q13516 323 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 ITIH4Q14624 930 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 POU6F1Q14863 301 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 PCSK7Q16549 785 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 C6orf132Q5T0Z8 1188 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TEDDM1Q5T9Z0 273 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 MBLAC2Q68D91 279 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 RETSATQ6NUM9 610 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 USP30Q70CQ3 517 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 PGBD5Q8N414 524 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 AADATQ8N5Z0 425 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 CCDC197Q8NCU1 140 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 GDAP1Q8TB36 358 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 MFSD3Q96ES6 412 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 NUDCD1Q96RS6 583 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 SRPK1Q96SB4 655 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 PAIP2Q9BPZ3 127 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TRIM56Q9BRZ2 755 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 SLC2A11Q9BYW1 496 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TREX1Q9NSU2 369 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 UCKL1Q9NWZ5 548 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 DCDC2Q9UHG0 476 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
HDAC6-215ENST00000465457 TEP1Q99973 2627 aaKnown RBP13.76□□□□□ -0.21
HDAC6-215ENST00000465457 UTP20O75691 2785 aaKnown RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 YKT6O15498 198 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 CSO75390 466 aaKnown RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 PIAS1O75925 651 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 NDST3O95803 873 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 DLDP09622 509 aaKnown RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 DHRS4L1P0CG22 281 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 NMBRP28336 390 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 RXRGP48443 463 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 ADPRHP54922 357 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 MAXP61244 160 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 THOC5Q13769 683 aaKnown RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 BMPR2Q13873 1038 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 CST6Q15828 149 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 TSTD2Q5T7W7 516 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 MROH9Q5TGP6 573 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 YTHDF3Q7Z739 585 aaKnown RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 PIGWQ7Z7B1 504 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 STRA8Q7Z7C7 330 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 KIAA0907Q7Z7F0 614 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 GALNT7Q86SF2 657 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 MMAAQ8IVH4 418 aaKnown RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 MFN1Q8IWA4 741 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 LRRC34Q8IZ02 419 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 NDUFAF2Q8N183 169 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 SLC25A45Q8N413 288 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 CARNMT1Q8N4J0 409 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 WFIKKN2Q8TEU8 576 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
HDAC6-215ENST00000465457 SPOCK2Q92563 424 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 RHOJQ9H4E5 214 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 FBRSQ9HAH7 460 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 VPS28Q9UK41 221 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 GRID1Q9ULK0 1009 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 PLA2G4CQ9UP65 541 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 PLLPQ9Y342 182 aa13.75□□□□□ -0.21
HDAC6-215ENST00000465457 GOLGA8RI6L899 631 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 K7ENP7 123 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 KLF11O14901 512 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 CASC3O15234 703 aaKnown RBP13.74□□□□□ -0.21
HDAC6-215ENST00000465457 BIRC5O15392 142 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 INSIG1O15503 277 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 FFAR2O15552 330 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 SLC7A4O43246 635 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 UGT1A9O60656 530 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 IL1BP01584 269 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 CR2P20023 1033 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 TAC1P20366 129 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 ETV4P43268 484 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 MAGEA12P43365 314 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 PSMD8P48556 350 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 AP1S1P61966 158 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 SLC20A2Q08357 652 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 SEPT6Q14141 434 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 HSP90AA5PQ58FG0 334 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 C3orf38Q5JPI3 329 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 SIRPB2Q5JXA9 342 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 INO80CQ6PI98 192 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-215ENST00000465457 CES3Q6UWW8 571 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 CCDC91Q7Z6B0 441 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 UNC5BQ8IZJ1 945 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 AHI1Q8N157 1196 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDAC6-215ENST00000465457 OR2T34Q8NGX1 318 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 SEC16BQ96JE7 1060 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 FEM1AQ9BSK4 669 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 ADGRE3Q9BY15 652 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 UGT1A7Q9HAW7 530 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 UGT1A10Q9HAW8 530 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 UGT1A8Q9HAW9 530 aa13.74□□□□□ -0.21
HDAC6-215ENST00000465457 MID2Q9UJV3 735 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms