RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 POU6F1Q14863 301 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 ARHGAP40Q5TG30 622 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 KCTD16Q68DU8 428 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 OGFOD3Q6PK18 319 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 TAF8Q7Z7C8 310 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 SLCO2A1Q92959 643 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 WBP1Q96G27 269 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 PLEKHG4BQ96PX9 1271 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 ZSCAN5AQ9BUG6 496 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 LGR4Q9BXB1 951 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 STRADBQ9C0K7 418 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 FGF22Q9HCT0 170 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 PIH1D1Q9NWS0 290 aaKnown RBP17.54■□□□□ 0.4
COL7A1-205ENST00000465238 NFKBIL1Q9UBC1 381 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-205ENST00000465238 NEU2Q9Y3R4 380 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 ARL5AQ9Y689 179 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 ARHGEF17Q96PE2 2063 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-205ENST00000465238 AHCTF1Q8WYP5 2266 aa17.54■□□□□ 0.4
COL7A1-205ENST00000465238 A0A1W2PQM1 296 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 PMS2P1A4D2B8 440 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 PLD2O14939 933 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 INPP4BO15327 924 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 RPLP0P05388 317 aaKnown RBP17.53■□□□□ 0.4
COL7A1-205ENST00000465238 PNLIPP16233 465 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 GLB1P16278 677 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 TPSB2P20231 275 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 SPAM1P38567 509 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 ADCY8P40145 1251 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 GRIA1P42261 906 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 CCL7P80098 99 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 DR1Q01658 176 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 LAMB3Q13751 1172 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 SEPT6Q14141 434 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 TPSAB1Q15661 275 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 TAF1BQ53T94 588 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-205ENST00000465238 PCSK4Q6UW60 755 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 SYDE1Q6ZW31 735 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-205ENST00000465238 TRAM1L1Q8N609 369 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 FAM46DQ8NEK8 389 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 OR4K2Q8NGD2 314 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 TMEM74Q96NL1 305 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 LRRN3Q9H3W5 708 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 EPB41L5Q9HCM4 733 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 CASS4Q9NQ75 786 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 ASIC3Q9UHC3 531 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 MOSPD1Q9UJG1 213 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 CDC23Q9UJX2 597 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 APPL1Q9UKG1 709 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 KCTD3Q9Y597 815 aa17.53■□□□□ 0.4
COL7A1-205ENST00000465238 COL6A6A6NMZ7 2263 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 SOD1P00441 154 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 CCKBRP32239 447 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 PTGIRP43119 386 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 INHBCP55103 352 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 CKAP4Q07065 602 aaKnown RBP17.52■□□□□ 0.4
COL7A1-205ENST00000465238 PTK6Q13882 451 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 PTPRCAPQ14761 206 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 CERCAMQ5T4B2 595 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 PDPK2PQ6A1A2 396 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 RAB11FIP2Q7L804 512 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 B3GNT8Q7Z7M8 397 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 FBXO39Q8N4B4 442 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 SPATA4Q8NEY3 305 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 KRT12Q99456 494 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 TMEM168Q9H0V1 697 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 CYP4F12Q9HCS2 524 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 IL26Q9NPH9 171 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 MRPL40Q9NQ50 206 aaKnown RBP17.52■□□□□ 0.4
COL7A1-205ENST00000465238 PCDHGA7Q9Y5G6 932 aa17.52■□□□□ 0.4
COL7A1-205ENST00000465238 GLYATL1P3A0A0U1RQE8 302 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 HEATR9A2RTY3 570 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 FADS2P1A8MWK0 482 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 LDB2O43679 373 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 NOBOXO60393 691 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 ASMTLO95671 621 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 UGT1A5P35504 534 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 HADHAP40939 763 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 MAGEA6P43360 314 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 NPY2RP49146 381 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 CFHR1Q03591 330 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 DHX34Q14147 1143 aaKnown RBP17.51■□□□□ 0.39
COL7A1-205ENST00000465238 KCNJ11Q14654 390 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 C14orf28Q4W4Y0 310 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 DOK6Q6PKX4 331 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 FAM151BQ6UXP7 276 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 CCNJLQ8IV13 435 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 ZNF843Q8N446 348 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 KIF18AQ8NI77 898 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 DTX3LQ8TDB6 740 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 CPT1BQ92523 772 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 C19orf43Q9BQ61 176 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 FOXP3Q9BZS1 431 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 DPEP2Q9H4A9 486 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 BFARQ9NZS9 450 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 PIEZO2Q9H5I5 2752 aa17.51■□□□□ 0.39
COL7A1-205ENST00000465238 TCRBV7S3A2A0A539 114 aa17.5■□□□□ 0.39
COL7A1-205ENST00000465238 PRSS38A1L453 326 aa17.5■□□□□ 0.39
COL7A1-205ENST00000465238 K7ENP7 123 aa17.5■□□□□ 0.39
COL7A1-205ENST00000465238 NUDT21O43809 227 aaKnown RBP17.5■□□□□ 0.39
COL7A1-205ENST00000465238 SLC25A14O95258 325 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms