RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GORASP1Q9BQQ3 440 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 TIMM29Q9BSF4 260 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 IL26Q9NPH9 171 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 IL17CQ9P0M4 197 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 CPNE7Q9UBL6 633 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 SLC23A2Q9UGH3 650 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 DNAJC16Q9Y2G8 782 aa25.51■■□□□ 1.67
U2AF1-206ENST00000464750 BAHCC1Q9P281 2608 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 GRID2IPA4D2P6 1211 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 TK2O00142 265 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 CDK14O94921 469 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 ZNF7P17097 686 aaPredicted RBP25.5■■□□□ 1.67
U2AF1-206ENST00000464750 CSTF2P33240 577 aaKnown RBP eCLIP25.5■■□□□ 1.67
U2AF1-206ENST00000464750 MAPK9P45984 424 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 GEMP55040 296 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 ZDHHC20Q5W0Z9 365 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 AADACL2Q6P093 401 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 PCSK4Q6UW60 755 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 ZNF547Q8IVP9 402 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 LRRC57Q8N9N7 239 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 AVL9Q8NBF6 648 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 AGBL5Q8NDL9 886 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 GDAP1Q8TB36 358 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 ALG3Q92685 438 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 FAM118BQ9BPY3 351 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 FICDQ9BVA6 458 aa25.5■■□□□ 1.67
U2AF1-206ENST00000464750 BUD23O43709 281 aaKnown RBP25.49■■□□□ 1.67
U2AF1-206ENST00000464750 ANXA9O76027 345 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 RBP3P10745 1247 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 FGF3P11487 239 aaPredicted RBP25.49■■□□□ 1.67
U2AF1-206ENST00000464750 CETN2P41208 172 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 EPHA4P54764 986 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 EIF3EP60228 445 aaKnown RBP25.49■■□□□ 1.67
U2AF1-206ENST00000464750 UBE2IP63279 158 aaKnown RBP25.49■■□□□ 1.67
U2AF1-206ENST00000464750 GTF2H3Q13889 308 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 TAF1BQ53T94 588 aaPredicted RBP25.49■■□□□ 1.67
U2AF1-206ENST00000464750 FAM151BQ6UXP7 276 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 PMEPA1Q969W9 287 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.49■■□□□ 1.67
U2AF1-206ENST00000464750 B3GNT4Q9C0J1 378 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 SCHIP1Q9P0W5 487 aaPredicted RBP25.49■■□□□ 1.67
U2AF1-206ENST00000464750 ATMQ13315 3056 aa25.49■■□□□ 1.67
U2AF1-206ENST00000464750 PDZK1P1A8MUH7 402 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 GPR39O43194 453 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 CD82P27701 267 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 SRSF6Q13247 344 aaKnown RBP25.48■■□□□ 1.67
U2AF1-206ENST00000464750 CHRNA6Q15825 494 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 SEPT7Q16181 437 aaKnown RBP25.48■■□□□ 1.67
U2AF1-206ENST00000464750 SNAP47Q5SQN1 464 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 TRAPPC5Q8IUR0 188 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 TMEM139Q8IV31 216 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 CCDC112Q8NEF3 446 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 DTX3LQ8TDB6 740 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 TAAR9Q96RI9 348 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 TBC1D10AQ9BXI6 508 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 PDP2Q9P2J9 529 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 PKP3Q9Y446 797 aa25.48■■□□□ 1.67
U2AF1-206ENST00000464750 GLYATL1P3A0A0U1RQE8 302 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 LILRA5A6NI73 299 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 PRR19A6NJB7 356 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 KCNN4O15554 427 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 STK10O94804 968 aaKnown RBP25.47■■□□□ 1.67
U2AF1-206ENST00000464750 TJP3O95049 919 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 AGTP01019 485 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 PYGMP11217 842 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 PSMB4P28070 264 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 TMEM115Q12893 351 aaPredicted RBP25.47■■□□□ 1.67
U2AF1-206ENST00000464750 ANKRD20A2Q5SQ80 823 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 ANKRD20A1Q5TYW2 823 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 ANKRD20A3Q5VUR7 823 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 KIAA1614Q5VZ46 1190 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 DARS2Q6PI48 645 aaKnown RBP25.47■■□□□ 1.67
U2AF1-206ENST00000464750 WDR74Q6RFH5 385 aaPredicted RBP25.47■■□□□ 1.67
U2AF1-206ENST00000464750 FAM129CQ86XR2 697 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 NCSTNQ92542 709 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 ART4Q93070 314 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.47■■□□□ 1.67
U2AF1-206ENST00000464750 PCDHB11Q9Y5F2 797 aa25.47■■□□□ 1.67
U2AF1-206ENST00000464750 EFSO43281 561 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A9O60656 530 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A6P19224 532 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A1P22309 533 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A4P22310 534 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A3P35503 534 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 C11orf96Q7Z7L8 435 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 VASH2Q86V25 355 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 DTX1Q86Y01 620 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 TRIM48Q8IWZ4 208 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 BRSK1Q8TDC3 778 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 TTC9Q92623 222 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 TTC25Q96NG3 672 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 DESI2Q9BSY9 194 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 ZCCHC2Q9C0B9 1178 aaKnown RBP25.46■■□□□ 1.67
U2AF1-206ENST00000464750 EPB41L1Q9H4G0 881 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A7Q9HAW7 530 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A10Q9HAW8 530 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 UGT1A8Q9HAW9 530 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 OCIAD1Q9NX40 245 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 TRIM10Q9UDY6 481 aa25.46■■□□□ 1.67
U2AF1-206ENST00000464750 AMFRQ9UKV5 643 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms