RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZBTB26Q9HCK0 441 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 POLR3BQ9NW08 1133 aaPredicted RBP9.84□□□□□ -0.83
PTPRD-207ENST00000463477 ELOVL2Q9NXB9 296 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 HACD3Q9P035 362 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 BCAP29Q9UHQ4 241 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 POMPQ9Y244 141 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 VWA7Q9Y334 891 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 WASF2Q9Y6W5 498 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 R4GN57 208 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 USP34Q70CQ2 3546 aa9.84□□□□□ -0.83
PTPRD-207ENST00000463477 SDHDO14521 159 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 BUD23O43709 281 aaKnown RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 ADAM23O75077 832 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 S1PR4O95977 384 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CES1P23141 567 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 NTSR1P30989 418 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 SESN3P58005 492 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 RPS24P62847 133 aaKnown RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CYLC2Q14093 348 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CCNIQ14094 377 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF460Q14592 562 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 IHHQ14623 411 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 TMEM215Q68D42 235 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 TMEM92Q6UXU6 159 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CHSY3Q70JA7 882 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 TMEM126BQ8IUX1 230 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 PGAM4Q8N0Y7 254 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 PELI3Q8N2H9 469 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 BBS5Q8N3I7 341 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 KYQ8NBH2 561 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 BRSK1Q8TDC3 778 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 WFIKKN2Q8TEU8 576 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 UCMAQ8WVF2 138 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 MYEOVQ96EZ4 313 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 LMLNQ96KR4 655 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 PRICKLE1Q96MT3 831 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 RPRD1AQ96P16 312 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 NR1H4Q96RI1 486 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 OLFM1Q99784 485 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 GABRG3Q99928 467 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 MGME1Q9BQP7 344 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 MEAF6Q9HAF1 191 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 UTP6Q9NYH9 597 aaKnown RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 THAP10Q9P2Z0 257 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 EP300Q09472 2414 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 GPR179Q6PRD1 2367 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CCDC189A1A4V9 331 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 A8MT66 165 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 F5H5T6 163 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CASQ2O14958 399 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 AURKAO14965 403 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 HRO43593 1189 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 PEX1O43933 1283 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 RPP40O75818 363 aaKnown RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 APBB3O95704 486 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 NDST3O95803 873 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 IMPDH1P20839 514 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 FDXRP22570 491 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 EPHA3P29320 983 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 OR1E1P30953 314 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 FNTBP49356 437 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CDH4P55283 916 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 MAXP61244 160 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 NAA20P61599 178 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 PRAMEP78395 509 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 IRX1P78414 480 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 SULT2A1Q06520 285 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 ITKQ08881 620 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 DMWDQ09019 674 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 ENPP2Q13822 863 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CSHL1Q14406 222 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 TYSND1Q2T9J0 566 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 EGFLAMQ63HQ2 1017 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 SDE2Q6IQ49 451 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 MRNIPQ6NTE8 343 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 DHDDSQ86SQ9 333 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 ADIPOR2Q86V24 386 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 KBTBD6Q86V97 674 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 MFN1Q8IWA4 741 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 CHPFQ8IZ52 775 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 LGI2Q8N0V4 545 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 HDAC10Q969S8 669 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 TRIB3Q96RU7 358 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 SEMA3CQ99985 751 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 NUF2Q9BZD4 464 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 WDR55Q9H6Y2 383 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 POLMQ9NP87 494 aaPredicted RBP9.83□□□□□ -0.84
PTPRD-207ENST00000463477 ABCB8Q9NUT2 735 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 PPM1HQ9ULR3 514 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 FANCMQ8IYD8 2048 aa9.83□□□□□ -0.84
PTPRD-207ENST00000463477 FAM186AA6NE01 2351 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 WDR87Q6ZQQ6 2873 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 LOC100653049A0A140TA62 436 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 AXIN1O15169 862 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 KRT34O76011 436 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 SERPINF2P08697 491 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 CCDC166P0CW27 439 aa9.82□□□□□ -0.84
PTPRD-207ENST00000463477 PABPC1P11940 636 aaKnown RBP9.82□□□□□ -0.84
PTPRD-207ENST00000463477 PSMD8P48556 350 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms