RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 ACDQ96AP0 544 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 SLC38A2Q96QD8 506 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 VPS35Q96QK1 796 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 BTBD1Q9H0C5 482 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 EBF3Q9H4W6 596 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 MRPS30Q9NP92 439 aaKnown RBP12.71□□□□□ -0.37
NUP58-206ENST00000463407 SCML2Q9UQR0 700 aa12.71□□□□□ -0.37
NUP58-206ENST00000463407 OR10H3O60404 316 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 HOXB2P14652 356 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 CACNA2D1P54289 1103 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 STXBP1P61764 594 aaKnown RBP12.71□□□□□ -0.38
NUP58-206ENST00000463407 TRIM16LQ309B1 348 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 LPCAT2Q7L5N7 544 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 CACTIN-AS1Q8N1I8 211 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 NKD2Q969F2 451 aaPredicted RBP12.71□□□□□ -0.38
NUP58-206ENST00000463407 RCN3Q96D15 328 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 ZNF354BQ96LW1 612 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 IPPKQ9H8X2 491 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 FBXL12Q9NXK8 326 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 C2P06681 752 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 MPSTP25325 297 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 TPP2P29144 1249 aaPredicted RBP12.71□□□□□ -0.38
NUP58-206ENST00000463407 GPD2P43304 727 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 UGT2B15P54855 530 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 RASGRP3Q8IV61 690 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 LRRC57Q8N9N7 239 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 C19orf18Q8NEA5 215 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 IRF7Q92985 503 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 GRIP2Q9C0E4 1043 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 DDX18Q9NVP1 670 aaKnown RBP12.71□□□□□ -0.38
NUP58-206ENST00000463407 PLLPQ9Y342 182 aa12.71□□□□□ -0.38
NUP58-206ENST00000463407 TRIM24O15164 1050 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 ZBTB22O15209 634 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 IPO13O94829 963 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 TNFAIP8O95379 198 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 HAPLN1P10915 354 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 IDH2P48735 452 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 RORBQ92753 470 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 GAL3ST4Q96RP7 486 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 GEMIN8Q9NWZ8 242 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 KCNE1P15382 129 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 NSG1P42857 185 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 COX10Q12887 443 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 FBXO48Q5FWF7 155 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 ZNF776Q68DI1 518 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 SPATA19Q7Z5L4 167 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 C8orf59Q8N0T1 100 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 SETD7Q8WTS6 366 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 PCBD2Q9H0N5 130 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 PNPLA8Q9NP80 782 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 ACSS2Q9NR19 701 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 DZANK1Q9NVP4 752 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 COPS7AQ9UBW8 275 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 TOP3BO95985 862 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 ACP5P13686 325 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 PRG2P13727 222 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 KCNQ1P51787 676 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 PHF19Q5T6S3 580 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 DAW1Q8N136 415 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 SIN3BO75182 1162 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 C8GP07360 202 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 COL6A2P12110 1019 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 TYRP14679 529 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 PPIBP23284 216 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 FBXO46Q6PJ61 603 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 FAM98AQ8NCA5 519 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 DNASE1L2Q92874 299 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 PTCD3Q96EY7 689 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 FBXL18Q96ME1 805 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 NKX2-4Q9H2Z4 354 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 LEFTY2O00292 366 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 UNGP13051 313 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 VARSP26640 1264 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 NUP62P37198 522 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 MAPK12P53778 367 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 ELF3P78545 371 aaPredicted RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 GHRHRQ02643 423 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 BNIP2Q12982 314 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 SUZ12Q15022 739 aaKnown RBP12.7□□□□□ -0.38
NUP58-206ENST00000463407 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 FBXL22Q6P050 247 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 IGSF21Q96ID5 467 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 C5orf34Q96MH7 638 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 NEK6Q9HC98 313 aa12.7□□□□□ -0.38
NUP58-206ENST00000463407 UNC5CO95185 931 aa12.69□□□□□ -0.38
NUP58-206ENST00000463407 DRD4P21917 467 aa12.69□□□□□ -0.38
NUP58-206ENST00000463407 PTGER3P43115 390 aa12.69□□□□□ -0.38
NUP58-206ENST00000463407 FASTKD3Q14CZ7 662 aaKnown RBP12.69□□□□□ -0.38
NUP58-206ENST00000463407 SMYD1Q8NB12 490 aa12.69□□□□□ -0.38
NUP58-206ENST00000463407 C19orf60Q96EN9 201 aa12.69□□□□□ -0.38
NUP58-206ENST00000463407 SLC47A1Q96FL8 570 aa12.69□□□□□ -0.38
NUP58-206ENST00000463407 DPYSL5Q9BPU6 564 aa12.69□□□□□ -0.38
NUP58-206ENST00000463407 RIOK2Q9BVS4 552 aaKnown RBP12.69□□□□□ -0.38
NUP58-206ENST00000463407 M0R2N6 131 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms