RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	AVL9	Q8NBF6	648 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	SYN2	Q92777	582 aa	Predicted RBP	10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	GLYATL1	Q969I3	302 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	IMP4	Q96G21	291 aa	Known RBP	10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	TGM7	Q96PF1	710 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	OR6C1	Q96RD1	312 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	RUFY1	Q96T51	708 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	TIMM29	Q9BSF4	260 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	ZSCAN5A	Q9BUG6	496 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	RAB33B	Q9H082	229 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	WASH6P	Q9NQA3	447 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	POT1	Q9NUX5	634 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	EPHA6	Q9UF33	1036 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	WDR37	Q9Y2I8	494 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	TTLL3	Q9Y4R7	772 aa		10.98	□□□□□ -0.65
PTPN7-204	ENST00000462815	CENPE	Q02224	2701 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	OR52A4P	A6NMU1	304 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	AURKA	O14965	403 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	MTX2	O75431	263 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	SPAG6	O75602	509 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	PROSC	O94903	275 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	NDUFA10	O95299	355 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	JCHAIN	P01591	159 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	PIRT	P0C851	137 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	ZNF7	P17097	686 aa	Predicted RBP	10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	BPI	P17213	487 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	NELFE	P18615	380 aa	Known RBP	10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	CA5A	P35218	305 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	UQCRFS1	P47985	274 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	SEPHS1	P49903	392 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	MLLT10	P55197	1068 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	FOXM1	Q08050	763 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	ERV3-1	Q14264	604 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	GPR18	Q14330	331 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	PDK2	Q15119	407 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	CCDC122	Q5T0U0	273 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	ALS2CL	Q60I27	953 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	CAVIN1	Q6NZI2	390 aa	Known RBP	10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	APLF	Q8IW19	511 aa	Predicted RBP	10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	CT55	Q8WUE5	264 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	RAPGEF5	Q92565	580 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	SLC41A2	Q96JW4	573 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	OLFM3	Q96PB7	478 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	SPATA16	Q9BXB7	569 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	TRIM55	Q9BYV6	548 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	OSGEPL1	Q9H4B0	414 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	ZFYVE1	Q9HBF4	777 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	MAGEE1	Q9HCI5	957 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	MLXIPL	Q9NP71	852 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	TLK1	Q9UKI8	766 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	ZNF711	Q9Y462	761 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	SPO11	Q9Y5K1	396 aa		10.97	□□□□□ -0.65
PTPN7-204	ENST00000462815	PCSK5	Q92824	1860 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	IGHV5-51	A0A0C4DH38	117 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	BLACE	A4D250	179 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	MYO1F	O00160	1098 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	KMO	O15229	486 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	CREG1	O75629	220 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	RFPL1	O75677	317 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	DNAJB5	O75953	348 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SLC25A14	O95258	325 aa	Predicted RBP	10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	VIP	P01282	170 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SERPING1	P05155	500 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	KRT7	P08729	469 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	RNF224	P0DH78	156 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	MX2	P20592	715 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SEMA5A	Q13591	1074 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SEPT6	Q14141	434 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SLC14A2	Q15849	920 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SEPT7	Q16181	437 aa	Known RBP	10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	C4orf17	Q53FE4	359 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	TDRD12	Q587J7	1177 aa	Known RBP	10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SLC9A4	Q6AI14	798 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	LRRTM4	Q86VH4	590 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	KCTD6	Q8NC69	237 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	GPR150	Q8NGU9	434 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	CCHCR1	Q8TD31	782 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	RNF157	Q96PX1	679 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	VPS35	Q96QK1	796 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	CEP41	Q9BYV8	373 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	LHX9	Q9NQ69	397 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	SHOC2	Q9UQ13	582 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	POLH	Q9Y253	713 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	DNAJC16	Q9Y2G8	782 aa		10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	BZW2	Q9Y6E2	419 aa	Known RBP	10.96	□□□□□ -0.65
PTPN7-204	ENST00000462815	ICE1	Q9Y2F5	2266 aa		10.96	□□□□□ -0.66
PTPN7-204	ENST00000462815	SPTBN1	Q01082	2364 aa	Known RBP	10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	CDC14C	A4D256	554 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	ZNF487	B1APH4	448 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	C21orf140	B9A014	251 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	MKRN2OS	H3BPM6	223 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	GAPDHS	O14556	408 aa	Predicted RBP	10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	VEGFD	O43915	354 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	MTA2	O94776	668 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	SORBS2	O94875	1100 aa	Known RBP	10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	FOLR1	P15328	257 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	KDELR1	P24390	212 aa		10.95	□□□□□ -0.66
PTPN7-204	ENST00000462815	RPL10	P27635	214 aa	Known RBP	10.95	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms