RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 APOC4-APOC2K7ER74 178 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 KMOO15229 486 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 DUX1O43812 170 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 PPFIA2O75334 1257 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 NDUFA10O95299 355 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 APOC2P02655 101 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ITGB2P05107 769 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF7P17097 686 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-207ENST00000461798 HLA-DPA1P20036 260 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 PTPN7P35236 360 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 MARCKSL1P49006 195 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF75DP51815 510 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 MC2RQ01718 297 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 MPP3Q13368 585 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ATP13A5Q4VNC0 1218 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 SIRPB2Q5JXA9 342 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF648Q5T619 568 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-207ENST00000461798 AGAP9Q5VTM2 703 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ALS2CLQ60I27 953 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 KAZNQ674X7 775 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 PID1Q7Z2X4 250 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 C11orf96Q7Z7L8 435 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 LRRTM4Q86VH4 590 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF761Q86XN6 746 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-207ENST00000461798 PHYKPLQ8IUZ5 450 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 ZNF547Q8IVP9 402 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 BMPERQ8N8U9 685 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 BRSK1Q8TDC3 778 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 KRT35Q92764 455 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 SGF29Q96ES7 293 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 MED8Q96G25 268 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 AHCYL2Q96HN2 611 aaKnown RBP9.03□□□□□ -0.96
BRCA1-207ENST00000461798 OXNAD1Q96HP4 312 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-207ENST00000461798 GOLPH3Q9H4A6 298 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 IL26Q9NPH9 171 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 PRDM8Q9NQV8 689 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 FBXO8Q9NRD0 319 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 KLC4Q9NSK0 619 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 UBP1Q9NZI7 540 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 IL17CQ9P0M4 197 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 TMEM9Q9P0T7 183 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 KLHL8Q9P2G9 620 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-207ENST00000461798 CPNE7Q9UBL6 633 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 CFAP46Q8IYW2 2715 aa9.03□□□□□ -0.96
BRCA1-207ENST00000461798 RCCD1A6NED2 376 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 STMND1H3BQB6 276 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 PJA2O43164 708 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 SNX2O60749 519 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 CDK14O94921 469 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 C9P02748 559 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 ANKRD34CP0C6C1 535 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 MPSTP25325 297 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 CTNNA2P26232 953 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 CTNNA1P35221 906 aaKnown RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 SLC19A1P41440 591 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 RAB15P59190 212 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 TMEM115Q12893 351 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 NFATC2Q13469 925 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 NOMO1Q15155 1222 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 LLGL1Q15334 1064 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 SLC1A5Q15758 541 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 KHDC1Q4VXA5 237 aaKnown RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 MANEAQ5SRI9 462 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 KIAA1614Q5VZ46 1190 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 RANBP10Q6VN20 620 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 TMEM26Q6ZUK4 368 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 DAAM2Q86T65 1068 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 ZC3H18Q86VM9 953 aaKnown RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 RBM12BQ8IXT5 1001 aaKnown RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 NCSTNQ92542 709 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 NKD1Q969G9 470 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 TEFMQ96QE5 360 aaKnown RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 C19orf43Q9BQ61 176 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 ARFGAP3Q9NP61 516 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 OCIAD1Q9NX40 245 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 SLC39A1Q9NY26 324 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 SCHIP1Q9P0W5 487 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 ZNF624Q9P2J8 865 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 TFR2Q9UP52 801 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 B3GALT1Q9Y5Z6 326 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 DNMT3AQ9Y6K1 912 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 HELZ2Q9BYK8 2649 aaKnown RBP9.02□□□□□ -0.97
BRCA1-207ENST00000461798 SCN8AQ9UQD0 1980 aa9.02□□□□□ -0.97
BRCA1-207ENST00000461798 KALRNO60229 2985 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 EFCAB7A8K855 629 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 AGRPO00253 132 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 TOX3O15405 576 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ZNF189O75820 626 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ANXA9O76027 345 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 VIPP01282 170 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 BRAFP15056 766 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 WT1P19544 449 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-207ENST00000461798 IDSP22304 550 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 RBL1P28749 1068 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ADRA1AP35348 466 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A3P35503 534 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 SPAM1P38567 509 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 CHRNA4P43681 627 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 TNNT3P45378 269 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms