RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 RAB6BQ9NRW1 208 aa14.06□□□□□ -0.16
THBS3-204ENST00000460050 PIH1D1Q9NWS0 290 aaKnown RBP14.06□□□□□ -0.16
THBS3-204ENST00000460050 SATB2Q9UPW6 733 aa14.06□□□□□ -0.16
THBS3-204ENST00000460050 DNAJC16Q9Y2G8 782 aa14.06□□□□□ -0.16
THBS3-204ENST00000460050 ZKSCAN5Q9Y2L8 839 aa14.06□□□□□ -0.16
THBS3-204ENST00000460050 ZFYVE26Q68DK2 2539 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 CCDC187A0A096LP49 1063 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 ERI2A8K979 691 aaKnown RBP14.05□□□□□ -0.16
THBS3-204ENST00000460050 E7EVH7 732 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 ZW10O43264 779 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 KRT37O76014 449 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 SLC2A4P14672 509 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 AKT1P31749 480 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 HADHAP40939 763 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 LSSP48449 732 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 INHBCP55103 352 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 XIAPP98170 497 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 HHEXQ03014 270 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 NFATC2Q13469 925 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 LONRF2Q1L5Z9 754 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.05□□□□□ -0.16
THBS3-204ENST00000460050 DRICH1Q6PGQ1 229 aaPredicted RBP14.05□□□□□ -0.16
THBS3-204ENST00000460050 IYDQ6PHW0 289 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 TMPRSS9Q7Z410 1059 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 C11orf96Q7Z7L8 435 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 LINC00523Q86TU6 105 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 ZNF761Q86XN6 746 aaPredicted RBP14.05□□□□□ -0.16
THBS3-204ENST00000460050 REXO1L1PQ8IX06 675 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 RASGEF1AQ8N9B8 481 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 OR52K1Q8NGK4 314 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 WDR36Q8NI36 951 aaKnown RBP14.05□□□□□ -0.16
THBS3-204ENST00000460050 LIN37Q96GY3 246 aaPredicted RBP14.05□□□□□ -0.16
THBS3-204ENST00000460050 DNAJC1Q96KC8 554 aaKnown RBP14.05□□□□□ -0.16
THBS3-204ENST00000460050 TMEM74Q96NL1 305 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 C19orf43Q9BQ61 176 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 STRADBQ9C0K7 418 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 RDH14Q9HBH5 336 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 PRDM8Q9NQV8 689 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 PAK5Q9P286 719 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 JRKLQ9Y4A0 524 aa14.05□□□□□ -0.16
THBS3-204ENST00000460050 IGHV1OR21-1A0A087WYE8 117 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 KIR2DS5A0A0G2JLQ3 304 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 A0A0G2JNG1 304 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 PMS2P1A4D2B8 440 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 PRR19A6NJB7 356 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 PDZK1P1A8MUH7 402 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 TMX2-CTNND1H3BSU7 103 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 KIR2DS3K7RE56 304 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 CCL22O00626 93 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 ZSCAN12O43309 604 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 TLX3O43711 291 aaPredicted RBP14.04□□□□□ -0.16
THBS3-204ENST00000460050 CPNE6O95741 557 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 ZSCAN5DPP0CG00 497 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 ITGALP20701 1170 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 CCKBRP32239 447 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 LMAN1P49257 510 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 CTSCP53634 463 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 SEMA5AQ13591 1074 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 KIR2DS5Q14953 304 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 TBC1D25Q3MII6 688 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 FOXR1Q6PIV2 292 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 PIM3Q86V86 326 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 SLITRK4Q8IW52 837 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 DNAAF3Q8N9W5 541 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 PDLIM2Q96JY6 352 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 STN1Q9H668 368 aaKnown RBP14.04□□□□□ -0.16
THBS3-204ENST00000460050 SARS2Q9NP81 518 aaKnown RBP14.04□□□□□ -0.16
THBS3-204ENST00000460050 TRMT1Q9NXH9 659 aaKnown RBP14.04□□□□□ -0.16
THBS3-204ENST00000460050 KCNK4Q9NYG8 393 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 CRLS1Q9UJA2 301 aa14.04□□□□□ -0.16
THBS3-204ENST00000460050 DRG1Q9Y295 367 aaKnown RBP14.04□□□□□ -0.16
THBS3-204ENST00000460050 OR2AG2A6NM03 316 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 OR5K4A6NMS3 321 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 AGAP14A8MT82 685 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 DXOO77932 396 aaKnown RBP14.03□□□□□ -0.16
THBS3-204ENST00000460050 SUN1O94901 812 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 APRTP07741 180 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 VCLP18206 1134 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 MSH3P20585 1137 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 CD1CP29017 333 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 MC4RP32245 332 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 RPL22P35268 128 aaKnown RBP14.03□□□□□ -0.16
THBS3-204ENST00000460050 KCNJ1P48048 391 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 ZFP36L1Q07352 338 aaKnown RBP14.03□□□□□ -0.16
THBS3-204ENST00000460050 CDH17Q12864 832 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 SEPT7Q16181 437 aaKnown RBP14.03□□□□□ -0.16
THBS3-204ENST00000460050 NKAIN2Q5VXU1 208 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 TMEM220Q6QAJ8 160 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 IGF2-ASQ6U949 168 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 PPP1R21Q6ZMI0 780 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 MICALCLQ6ZW33 695 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 USP53Q70EK8 1073 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 DET1Q7L5Y6 550 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 GSTA5Q7RTV2 222 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 SNX20Q7Z614 316 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 SLC9B2Q86UD5 537 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 LSMEM2Q8N112 164 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 PRELID2Q8N945 189 aa14.03□□□□□ -0.16
THBS3-204ENST00000460050 SNIP1Q8TAD8 396 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms