RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 SCARF2Q96GP6 870 aaPredicted RBP16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 OR2M4Q96R27 311 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 SLC29A3Q9BZD2 475 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 SIDT1Q9NXL6 827 aaKnown RBP16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 B4GALT6Q9UBX8 382 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 JRKLQ9Y4A0 524 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 PLEKHM1Q9Y4G2 1056 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 PCDHGA6Q9Y5G7 932 aa16.44■□□□□ 0.22
TMEM50B-205ENST00000459909 DOPEY1Q5JWR5 2465 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 TRBV23OR9-2A0A075B6M9 112 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 PIPSLA2A3N6 862 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 J3KR12 359 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 DFFAO00273 331 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 TRAFD1O14545 582 aaPredicted RBP16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 DNAJB5O75953 348 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 LDLRP01130 860 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 PYGMP11217 842 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 ZNF28P17035 718 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 RGRP47804 291 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 NDST2P52849 883 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 COPS2P61201 443 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 HHEXQ03014 270 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 MRPL49Q13405 166 aaKnown RBP16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 TFDP2Q14188 446 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 NCBP2-AS2Q69YL0 99 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 AADACL2Q6P093 401 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 PQLC3Q8N755 202 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 GALNT6Q8NCL4 622 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 SH3KBP1Q96B97 665 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 STAMBPL1Q96FJ0 436 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 HEMGNQ9BXL5 484 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 TRIM55Q9BYV6 548 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 STN1Q9H668 368 aaKnown RBP16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 SARS2Q9NP81 518 aaKnown RBP16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 ERRFI1Q9UJM3 462 aaPredicted RBP16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 PCDHGA9Q9Y5G4 932 aaKnown RBP16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 CRYBG3Q68DQ2 2970 aa16.43■□□□□ 0.22
TMEM50B-205ENST00000459909 ESPL1Q14674 2120 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 hCG_1818297A0A087WSY0 165 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 ARHGAP42A6NI28 874 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 MFSD11O43934 449 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 CST8O60676 142 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 PRAMEF11O60813 436 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 MAP3K6O95382 1288 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 ANKRD34CP0C6C1 535 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 ZFXP17010 805 aaPredicted RBP16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 VARSP26640 1264 aaKnown RBP16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 EPHA4P54764 986 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 FOXM1Q08050 763 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 LRP8Q14114 963 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 CNGA3Q16281 694 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 PPP2R5EQ16537 467 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 TAZQ16635 292 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 SEL1L2Q5TEA6 688 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 CCDC181Q5TID7 509 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 RAET1GQ6H3X3 334 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 TSEN2Q8NCE0 465 aaKnown RBP16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 DTD2Q96FN9 168 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 SLC25A23Q9BV35 468 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 OSBPL8Q9BZF1 889 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 SLC39A8Q9C0K1 460 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 EPB41L1Q9H4G0 881 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 LRRC19Q9H756 370 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 MLXIPLQ9NP71 852 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 KLHL3Q9UH77 587 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 HEY1Q9Y5J3 304 aa16.42■□□□□ 0.22
TMEM50B-205ENST00000459909 GOLGA6CA6NDK9 693 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 GOLGA6BA6NDN3 693 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 HEXIM1O94992 359 aaKnown RBP16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 CCNYL3P0C7X3 344 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 GOLGA6DP0CG33 693 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 ETV3P41162 512 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 PAPOLAP51003 745 aaKnown RBP16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 NSUN2Q08J23 767 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 NFATC2Q13469 925 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 PAFAH1B3Q15102 231 aaKnown RBP16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 PYCR3Q53H96 274 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 SLC9A4Q6AI14 798 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 DOK6Q6PKX4 331 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 ARHGAP12Q8IWW6 846 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 SEC14L1Q92503 715 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 SPOCK2Q92563 424 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 TCTN2Q96GX1 697 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 ZNF768Q9H5H4 540 aaKnown RBP16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 GOLGA6AQ9NYA3 693 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 MED13Q9UHV7 2174 aa16.41■□□□□ 0.22
TMEM50B-205ENST00000459909 A6NCN8 305 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 VIPR1P32241 457 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 CXCR5P32302 372 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 GARSP41250 739 aaKnown RBP16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 MAPK9P45984 424 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 GBE1Q04446 702 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 DNASE1L3Q13609 305 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 IL11RAQ14626 422 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 PAPD7Q5XG87 772 aaKnown RBP16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 DENND2CQ68D51 928 aa16.4■□□□□ 0.22
TMEM50B-205ENST00000459909 PLXDC1Q8IUK5 500 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms