RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CTBSQ01459 385 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 ILF3Q12906 894 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 CALCOCO2Q13137 446 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GTF2H3Q13889 308 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 CRYMQ14894 314 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 FASTKD3Q14CZ7 662 aaKnown RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 SUZ12Q15022 739 aaKnown RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 TRADDQ15628 312 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 PROX2Q3B8N5 592 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 BBS9Q3SYG4 887 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GPR33Q49SQ1 333 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 DNAJC21Q5F1R6 531 aaKnown RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 C6orf132Q5T0Z8 1188 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 ZDHHC24Q6UX98 284 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 C11orf96Q7Z7L8 435 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 LRRTM4Q86VH4 590 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 IGDCC3Q8IVU1 814 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 MMGT1Q8N4V1 131 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 BEND7Q8N7W2 519 aaPredicted RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 OR6P1Q8NGX9 317 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 FCRL3Q96P31 734 aaPredicted RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 COPS8Q99627 209 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GSDMCQ9BYG8 508 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 PLAC1Q9HBJ0 212 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 CATSPERZQ9NTU4 200 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 TRNAU1APQ9NX07 287 aaKnown RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 WHRNQ9P202 907 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 ZNHIT2Q9UHR6 403 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 ANAPC5Q9UJX4 755 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 UTP11Q9Y3A2 253 aaKnown RBP12.66□□□□□ -0.38
COL18A1-206ENST00000459895 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 CSNK1G3Q9Y6M4 447 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 U3KQA8 63 aa12.66□□□□□ -0.38
COL18A1-206ENST00000459895 ZCWPW2A0A1B0GU75 182 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 FAM237BA0A1B0GVD1 139 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 SDR42E2A6NKP2 422 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 GOLGA8KD6RF30 607 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 GOLGA8TH3BQL2 631 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 SMAPO00193 183 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 YY2O15391 372 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 CDK14O94921 469 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 VAPBO95292 243 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 ANXA6P08133 673 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 ALPPL2P10696 532 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 CSRP1P21291 193 aaKnown RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 PBLDP30039 288 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 ARCN1P48444 511 aaKnown RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 ARL4CP56559 192 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 TMEM115Q12893 351 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 DNAJC3Q13217 504 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 LRP8Q14114 963 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 INSCQ1MX18 579 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 HP1BP3Q5SSJ5 553 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 ARMC3Q5W041 872 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 ZCCHC8Q6NZY4 707 aaKnown RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 PACS1Q6VY07 963 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 CHST15Q7LFX5 561 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 TAS2R42Q7RTR8 314 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 TAF8Q7Z7C8 310 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 LDB1Q86U70 411 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 GKN2Q86XP6 184 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 SLC35F3Q8IY50 421 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 OTUD6BQ8N6M0 293 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 CEP112Q8N8E3 955 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 OR4L1Q8NH43 312 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 GPBAR1Q8TDU6 330 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 RHBDD1Q8TEB9 315 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 CNDP2Q96KP4 475 aaKnown RBP12.65□□□□□ -0.38
COL18A1-206ENST00000459895 L2HGDHQ9H9P8 463 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 ZDHHC3Q9NYG2 299 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 TAAR2Q9P1P5 351 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 SLC23A2Q9UGH3 650 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 DOLKQ9UPQ8 538 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 RPS6KL1Q9Y6S9 549 aa12.65□□□□□ -0.38
COL18A1-206ENST00000459895 KNL1Q8NG31 2342 aa12.65□□□□□ -0.39
COL18A1-206ENST00000459895 PRR19A6NJB7 356 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 BHMG1C9JSJ3 638 aaPredicted RBP12.64□□□□□ -0.39
COL18A1-206ENST00000459895 E7ESA3 106 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 NDC80O14777 642 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 USP1O94782 785 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 KCNK5O95279 499 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 EML2O95834 649 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 SDHBP21912 280 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 ELK3P41970 407 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 PRLHRP49683 370 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 ACADVLP49748 655 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 GUCY2DQ02846 1103 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 ITIH4Q14624 930 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 ANKRD20A4Q4UJ75 823 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 BCL7AQ4VC05 210 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 FASTKD1Q53R41 847 aaKnown RBP12.64□□□□□ -0.39
COL18A1-206ENST00000459895 XKR5Q6UX68 686 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 TMEM135Q86UB9 458 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 ANKMY2Q8IV38 441 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 UNC5BQ8IZJ1 945 aa12.64□□□□□ -0.39
COL18A1-206ENST00000459895 PDIK1LQ8N165 341 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms