RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CPA3P15088 417 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 BPIP17213 487 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 DRD4P21917 467 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 MMP12P39900 470 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ABCG1P45844 678 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 SPINT3P49223 89 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 CSRP3P50461 194 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 LIMK1P53667 647 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 SEC24CP53992 1094 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 TAS2R39P59534 338 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 XIAPP98170 497 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 PPARDQ03181 441 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 SFSWAPQ12872 951 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 MTAPQ13126 283 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 NFATC2Q13469 925 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 PEX6Q13608 980 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 PTPRCAPQ14761 206 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 STARD3Q14849 445 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 UBXN2BQ14CS0 331 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 CSRP2Q16527 193 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 CDKN3Q16667 212 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ZNF284Q2VY69 593 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 RBM20Q5T481 1227 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 C9orf64Q5T6V5 341 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 LRRC8EQ6NSJ5 796 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 FBXL19Q6PCT2 694 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 TSSK4Q6SA08 328 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 CDHR3Q6ZTQ4 885 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 TTC7BQ86TV6 843 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 RALGPS2Q86X27 583 aaPredicted RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 ZSWIM9Q86XI8 627 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 NRSN1Q8IZ57 195 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 KIRREL3Q8IZU9 778 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 NKAPQ8N5F7 415 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 CCDC197Q8NCU1 140 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ST13P5Q8NFI4 369 aaPredicted RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 PIP4K2CQ8TBX8 421 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 PPP4R1Q8TF05 950 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 KCNJ9Q92806 393 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 NDNQ99608 321 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 MRPL57Q9BQC6 102 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 IER2Q9BTL4 223 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ZSCAN5AQ9BUG6 496 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 MRPL46Q9H2W6 279 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 CHRDQ9H2X0 955 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 FAM96AQ9H5X1 160 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ASB8Q9H765 288 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 CAB39LQ9H9S4 337 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 PCDH12Q9NPG4 1184 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 FGFR1OP2Q9NVK5 253 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 SIRPGQ9P1W8 387 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 COPG2Q9UBF2 871 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 TRMT6Q9UJA5 497 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 GMEB2Q9UKD1 530 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 ANGPTL2Q9UKU9 493 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 TMCO1Q9UM00 188 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 FNDC3AQ9Y2H6 1198 aaKnown RBP8.87□□□□□ -0.99
VPS50-207ENST00000458530 CRYL1Q9Y2S2 319 aa8.87□□□□□ -0.99
VPS50-207ENST00000458530 TRBV5-4A0A0C4DH59 114 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 WDR91A4D1P6 747 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 TMEM114B3SHH9 223 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 NEMP1O14524 444 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 EDF1O60869 148 aaKnown RBP8.86□□□□□ -0.99
VPS50-207ENST00000458530 SERPINE1P05121 402 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 CTSLP07711 333 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 TIMP2P16035 220 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 DRD1P21728 446 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 CD72P21854 359 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 ACRV1P26436 265 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 CTHP32929 405 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 RGS4P49798 205 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 ATP6V0D1P61421 351 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 NAA20P61599 178 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 SPEM2Q0P670 501 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 GRSF1Q12849 480 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS50-207ENST00000458530 STX3Q13277 289 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 SEMA3AQ14563 771 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 ACAP2Q15057 778 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 CHI3L2Q15782 390 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 CRY1Q16526 586 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 ZSCAN26Q16670 478 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 TTLL9Q3SXZ7 439 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 HSF5Q4G112 596 aaPredicted RBP8.86□□□□□ -0.99
VPS50-207ENST00000458530 PTRHD1Q6GMV3 140 aaKnown RBP8.86□□□□□ -0.99
VPS50-207ENST00000458530 PSAPL1Q6NUJ1 521 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 ZYG11AQ6WRX3 759 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 PRR23CQ6ZRP0 262 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 PARS2Q7L3T8 475 aaKnown RBP8.86□□□□□ -0.99
VPS50-207ENST00000458530 SPATA21Q7Z572 469 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 LDB1Q86U70 411 aaPredicted RBP8.86□□□□□ -0.99
VPS50-207ENST00000458530 TSPAN33Q86UF1 283 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 SLC22A9Q8IVM8 553 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 CHPFQ8IZ52 775 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 NXPE1Q8N323 547 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 ZNF513Q8N8E2 541 aaPredicted RBP8.86□□□□□ -0.99
VPS50-207ENST00000458530 ZNF398Q8TD17 642 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 C7orf26Q96N11 449 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 PANX3Q96QZ0 392 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 SIKE1Q9BRV8 207 aa8.86□□□□□ -0.99
VPS50-207ENST00000458530 TRIM55Q9BYV6 548 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms