RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 PDZK1P1A8MUH7 402 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 HALP42357 657 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 MAPK9P45984 424 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 WNT3AP56704 352 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 COPS2P61201 443 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 UBE2IP63279 158 aaKnown RBP13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 WASHC5Q12768 1159 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 XRCC4Q13426 336 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 ITGA9Q13797 1035 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 PPP2R5EQ16537 467 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 SNAP47Q5SQN1 464 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 LDLRAP1Q5SW96 308 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 CCDC181Q5TID7 509 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 KAZNQ674X7 775 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 ANKS6Q68DC2 871 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 CRTC3Q6UUV7 619 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 ABRAXAS1Q6UWZ7 409 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 TMEM26Q6ZUK4 368 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 PID1Q7Z2X4 250 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 NLGN4XQ8N0W4 816 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 NLGN4YQ8NFZ3 816 aaPredicted RBP13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 GDAP1Q8TB36 358 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 HTR3CQ8WXA8 447 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 ZNF514Q96K75 400 aaPredicted RBP13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 FSD1LQ9BXM9 530 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 TRIM5Q9C035 493 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 FAM117AQ9C073 453 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 PRDM8Q9NQV8 689 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 OCIAD1Q9NX40 245 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 TMEM9Q9P0T7 183 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 HYOU1Q9Y4L1 999 aa13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 PCYT1BQ9Y5K3 369 aaPredicted RBP13.23□□□□□ -0.29
SMARCA2-216ENST00000457226 hCG_1818297A0A087WSY0 165 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 ZNF891A8MT65 544 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 A8MU76 341 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 APOC4-APOC2K7ER74 178 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 POLR1CO15160 346 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 RAD1O60671 282 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 ANXA9O76027 345 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 STK10O94804 968 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 UBXN7O94888 489 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 APOC2P02655 101 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 PECAM1P16284 738 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 NFKB1P19838 968 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 SPAM1P38567 509 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 CETN2P41208 172 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 MC1RQ01726 317 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 TMEM115Q12893 351 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 SIRPB2Q5JXA9 342 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 ITPRIPL1Q6GPH6 555 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 KLHL35Q6PF15 583 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 KDELC1Q6UW63 502 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 DAAM2Q86T65 1068 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 ZC3H18Q86VM9 953 aaKnown RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 TRAPPC5Q8IUR0 188 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 EXTL1Q92935 676 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 LRRC45Q96CN5 670 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 HAUS1Q96CS2 278 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 CXorf40BQ96DE9 158 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 RTP4Q96DX8 246 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 ZDHHC12Q96GR4 267 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 QKIQ96PU8 341 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 SEMA4CQ9C0C4 833 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 ADNPQ9H2P0 1102 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 UBP1Q9NZI7 540 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 SAE1Q9UBE0 346 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 PILRAQ9UKJ1 303 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 EFR3BQ9Y2G0 817 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 SPO11Q9Y5K1 396 aa13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 DNMT3AQ9Y6K1 912 aaPredicted RBP13.22□□□□□ -0.29
SMARCA2-216ENST00000457226 GLYATL1P3A0A0U1RQE8 302 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 PRR19A6NJB7 356 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 C9P02748 559 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 AMD1P17707 334 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 CD68P34810 354 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 PDE1BQ01064 536 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 MAP7Q14244 749 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 IL11RAQ14626 422 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 SLC1A5Q15758 541 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 TBR1Q16650 682 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 LINC00303Q3SY05 128 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 ATP13A5Q4VNC0 1218 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 BORAQ6PGQ7 559 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 BBS12Q6ZW61 710 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 GLT6D1Q7Z4J2 308 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 AMZ2Q86W34 360 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 ZNF567Q8N184 647 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 BEND7Q8N7W2 519 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 TC2NQ8N9U0 490 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 SLC45A3Q96JT2 553 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 C9orf72Q96LT7 481 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 TBC1D10AQ9BXI6 508 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 GPN2Q9H9Y4 310 aaPredicted RBP13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 SLC40A1Q9NP59 571 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 ARFGAP3Q9NP61 516 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 IL26Q9NPH9 171 aa13.21□□□□□ -0.29
SMARCA2-216ENST00000457226 RSPH14Q9UHP6 348 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms