RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ATRAIDQ6UW56 229 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 DPH6Q7L8W6 267 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 VN1R5Q7Z5H4 357 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 C11orf74Q86VG3 221 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 RNF135Q8IUD6 432 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 C4orf19Q8IY42 314 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GPD1LQ8N335 351 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 POC5Q8NA72 575 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ST13P5Q8NFI4 369 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ZC3H15Q8WU90 426 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 RAB2BQ8WUD1 216 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 YIPF6Q96EC8 236 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TMEM176AQ96HP8 235 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ZMAT2Q96NC0 199 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 VPS35Q96QK1 796 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GPR22Q99680 433 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 IRF2BPLQ9H1B7 796 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 MMP28Q9H239 520 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PPCSQ9HAB8 311 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PALMDQ9NP74 551 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 UTP6Q9NYH9 597 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SLC25A37Q9NYZ2 338 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 MARCH4Q9P2E8 410 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FNDC1Q4ZHG4 1894 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ATG2BQ96BY7 2078 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CRYBG3Q68DQ2 2970 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 A0A1B0GVM2 712 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 A8MT66 165 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 G3V3Q6 166 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FZD9O00144 591 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SCAMP3O14828 347 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GPIP06744 558 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 KCNA2P16389 499 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FMO3P31513 532 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ZNF143P52747 638 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 NRG1Q02297 640 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ART3Q13508 389 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CDK10Q15131 360 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 UAP1L1Q3KQV9 507 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PPP1R26Q5T8A7 1209 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TTC23LQ6PF05 361 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ARHGAP36Q6ZRI8 547 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ISCA2Q86U28 154 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ARMC8Q8IUR7 673 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PARP16Q8N5Y8 322 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PAPD5Q8NDF8 572 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 VANGL1Q8TAA9 524 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SREK1Q8WXA9 508 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 EFHD2Q96C19 240 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CENPNQ96H22 339 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ZBED2Q9BTP6 218 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 COA1Q9GZY4 146 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ABHD16BQ9H3Z7 469 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM118AQ9NWS6 357 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GGA3Q9NZ52 723 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GTF2IRD1Q9UHL9 959 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PTPRDP23468 1912 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CABYRO75952 493 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SYPP08247 313 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM157BP0CG42 384 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 AZGP1P25311 298 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PCYT1AP49585 367 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 LSM11P83369 360 aaKnown RBP eCLIP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CDK5R2Q13319 367 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FASTKQ14296 549 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 ZXDCQ2QGD7 858 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 RUNDC3AQ59EK9 446 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 STXBP5Q5T5C0 1151 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SLX4IPQ5VYV7 408 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 LRRC8EQ6NSJ5 796 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TMC5Q6UXY8 1006 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FKBP9P1Q75LS8 142 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 KDELC2Q7Z4H8 507 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TMC8Q8IU68 726 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 KIAA1958Q8N8K9 716 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 OR2T11Q8NH01 316 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SNX18Q96RF0 628 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GBA2Q9HCG7 927 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 RAVER2Q9HCJ3 691 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SPAG4Q9NPE6 437 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TIGARQ9NQ88 270 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TLR8Q9NR97 1041 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 TMPRSS11EQ9UL52 423 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CDY2AQ9Y6F7 541 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CDY1Q9Y6F8 540 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 PRR14LQ5THK1 2151 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 THSD7BQ9C0I4 1608 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FANCMQ8IYD8 2048 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 SHISA3A0PJX4 238 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 WWP2O00308 870 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CXCL8P10145 99 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 CYP2A6P11509 494 aaPredicted RBP4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 DCTP40126 519 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 HTR6P50406 440 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FCGRTP55899 365 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 GRAPQ13588 217 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 AMHR2Q16671 573 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 FAM171A1Q5VUB5 890 aa4.5□□□□□ -1.69
DEPDC1-202ENST00000456315 LCN8Q6JVE9 175 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms