RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 LIPCP11150 499 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 PYGMP11217 842 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 ZNF7P17097 686 aaPredicted RBP17.62■□□□□ 0.41
MSH6-207ENST00000456246 CSTF2P33240 577 aaKnown RBP eCLIP17.62■□□□□ 0.41
MSH6-207ENST00000456246 PPM1FP49593 454 aaPredicted RBP17.62■□□□□ 0.41
MSH6-207ENST00000456246 PDE1BQ01064 536 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 VAC14Q08AM6 782 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 CLN3Q13286 438 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 ATP13A5Q4VNC0 1218 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 ANKRD20A2Q5SQ80 823 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 LDLRAP1Q5SW96 308 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 ANKRD20A1Q5TYW2 823 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 ANKRD20A3Q5VUR7 823 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 WDR74Q6RFH5 385 aaPredicted RBP17.62■□□□□ 0.41
MSH6-207ENST00000456246 CRTC3Q6UUV7 619 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 ZNF574Q6ZN55 896 aaPredicted RBP17.62■□□□□ 0.41
MSH6-207ENST00000456246 AGBL5Q8NDL9 886 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 GDAP1Q8TB36 358 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 C19orf43Q9BQ61 176 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 UCK1Q9HA47 277 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 ARFGAP3Q9NP61 516 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 SMOXQ9NWM0 555 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 CPNE7Q9UBL6 633 aa17.62■□□□□ 0.41
MSH6-207ENST00000456246 FEZ2Q9UHY8 353 aaPredicted RBP17.62■□□□□ 0.41
MSH6-207ENST00000456246 TRBV23OR9-2A0A075B6M9 112 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 C5orf60A6NFR6 353 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 LILRA5A6NI73 299 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 C2orf81A6NN90 581 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 F5H423 210 aaPredicted RBP17.61■□□□□ 0.41
MSH6-207ENST00000456246 STX7O15400 261 aaKnown RBP17.61■□□□□ 0.41
MSH6-207ENST00000456246 ITIH1P19827 911 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 CSF2RBP32927 897 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 MAPK10P53779 464 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 RHDQ02161 417 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 TMEM115Q12893 351 aaPredicted RBP17.61■□□□□ 0.41
MSH6-207ENST00000456246 NFATC2Q13469 925 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 NKAIN2Q5VXU1 208 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 WASH2PQ6VEQ5 465 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 RANBP10Q6VN20 620 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 TRAPPC5Q8IUR0 188 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 RNF10Q8N5U6 811 aaKnown RBP17.61■□□□□ 0.41
MSH6-207ENST00000456246 DDHD1Q8NEL9 900 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 FICDQ9BVA6 458 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 TSGA10Q9BZW7 698 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 WASH6PQ9NQA3 447 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 PDP2Q9P2J9 529 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 PCDHGA3Q9Y5H0 932 aa17.61■□□□□ 0.41
MSH6-207ENST00000456246 PDZK1P1A8MUH7 402 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 ATXN7O15265 892 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 MTX2O75431 263 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 HOXB3P14651 431 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 XRCC1P18887 633 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 LPOP22079 712 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 IDSP22304 550 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 PSMB4P28070 264 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 ADRA1AP35348 466 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 GSDMDP57764 484 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 UBE2IP63279 158 aaKnown RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 TAF1AQ15573 450 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 ZNF648Q5T619 568 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 AGAP9Q5VTM2 703 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 ABRAXAS1Q6UWZ7 409 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 FAM151BQ6UXP7 276 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 TRIM48Q8IWZ4 208 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 RBM12BQ8IXT5 1001 aaKnown RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 SPC24Q8NBT2 197 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 USP7Q93009 1102 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 ZNF514Q96K75 400 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 TAAR9Q96RI9 348 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 CCNL2Q96S94 520 aaPredicted RBP17.6■□□□□ 0.41
MSH6-207ENST00000456246 C10orf88Q9H8K7 445 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 CPNE5Q9HCH3 593 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 PRDM8Q9NQV8 689 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 POT1Q9NUX5 634 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 PCDHB11Q9Y5F2 797 aa17.6■□□□□ 0.41
MSH6-207ENST00000456246 PRAMEF33A0A0G2JMD5 474 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 KLHL33A6NCF5 533 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 PRR19A6NJB7 356 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.59■□□□□ 0.41
MSH6-207ENST00000456246 K7ENP7 123 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 ERVH48-1M5A8F1 160 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 PRAMEF10O60809 474 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 CRTAMO95727 393 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 AGTP01019 485 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 VIPP01282 170 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 ETV5P41161 510 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 RAB15P59190 212 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 CHRNA6Q15825 494 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 PLA2G4EQ3MJ16 856 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 KHDC1Q4VXA5 237 aaKnown RBP17.59■□□□□ 0.41
MSH6-207ENST00000456246 ARHGAP40Q5TG30 622 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 INO80CQ6PI98 192 aaPredicted RBP17.59■□□□□ 0.41
MSH6-207ENST00000456246 CCDC81Q6ZN84 652 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 ZNF761Q86XN6 746 aaPredicted RBP17.59■□□□□ 0.41
MSH6-207ENST00000456246 ZNF547Q8IVP9 402 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 KLHDC8BQ8IXV7 354 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 RCBTB1Q8NDN9 531 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 WBP1Q96G27 269 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 GORASP1Q9BQQ3 440 aa17.59■□□□□ 0.41
MSH6-207ENST00000456246 DESI2Q9BSY9 194 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms