RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 GPRC6AQ5T6X5 926 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 SPRED1Q7Z699 444 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 CCNJLQ8IV13 435 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 ZNF547Q8IVP9 402 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 SFRP1Q8N474 314 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 TAB3Q8N5C8 712 aaPredicted RBP17.1■□□□□ 0.33
USP39-208ENST00000455732 GDAP1Q8TB36 358 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 ZNF398Q8TD17 642 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 LRRN3Q9H3W5 708 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 UGT1A7Q9HAW7 530 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 UGT1A10Q9HAW8 530 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 UGT1A8Q9HAW9 530 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 EIF2B3Q9NR50 452 aaKnown RBP17.1■□□□□ 0.33
USP39-208ENST00000455732 TBC1D29Q9UFV1 150 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 KCNK6Q9Y257 313 aa17.1■□□□□ 0.33
USP39-208ENST00000455732 MROH6A6NGR9 719 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 USP27XA6NNY8 438 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 D6RAR5 112 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 E7EVH7 732 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 PGRMC1O00264 195 aaKnown RBP17.09■□□□□ 0.33
USP39-208ENST00000455732 RPLP0P05388 317 aaKnown RBP17.09■□□□□ 0.33
USP39-208ENST00000455732 ZSCAN5DPP0CG00 497 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 SLC2A4P14672 509 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 CA5AP35218 305 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 EIF2S3P41091 472 aaKnown RBP17.09■□□□□ 0.33
USP39-208ENST00000455732 GPR3P46089 330 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 GTF2H3Q13889 308 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 GSE1Q14687 1217 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 COL28A1Q2UY09 1125 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 IGF2-ASQ6U949 168 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 CRTC3Q6UUV7 619 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 C11orf96Q7Z7L8 435 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 PRUNE1Q86TP1 453 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 LSMEM2Q8N112 164 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 OR52K1Q8NGK4 314 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 STYXQ8WUJ0 223 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 PATE1Q8WXA2 126 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 FGF11Q92914 225 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 ULK4Q96C45 1275 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 PRR11Q96HE9 360 aaPredicted RBP17.09■□□□□ 0.33
USP39-208ENST00000455732 DNAJC1Q96KC8 554 aaKnown RBP17.09■□□□□ 0.33
USP39-208ENST00000455732 GFM1Q96RP9 751 aaKnown RBP17.09■□□□□ 0.33
USP39-208ENST00000455732 OSBPL9Q96SU4 736 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 ASCL3Q9NQ33 180 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 CASS4Q9NQ75 786 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 NLE1Q9NVX2 485 aaPredicted RBP17.09■□□□□ 0.33
USP39-208ENST00000455732 SNX12Q9UMY4 172 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 SATB2Q9UPW6 733 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 IGSF10Q6WRI0 2623 aa17.09■□□□□ 0.33
USP39-208ENST00000455732 EML2O95834 649 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 APRTP07741 180 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 F3P13726 295 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 ZNF7P17097 686 aaPredicted RBP17.08■□□□□ 0.32
USP39-208ENST00000455732 TPH1P17752 444 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 ITGALP20701 1170 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 KCNJ1P48048 391 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 LMAN1P49257 510 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 B4GALNT1Q00973 533 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 LAMB3Q13751 1172 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 POU6F1Q14863 301 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 CYP1B1Q16678 543 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 CLPPQ16740 277 aaPredicted RBP17.08■□□□□ 0.32
USP39-208ENST00000455732 INSCQ1MX18 579 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 C3orf38Q5JPI3 329 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 IYDQ6PHW0 289 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 GSTA5Q7RTV2 222 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 SNX20Q7Z614 316 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 B3GNT8Q7Z7M8 397 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 PDZD3Q86UT5 571 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 TRAPPC5Q8IUR0 188 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 DNAAF3Q8N9W5 541 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 ACTRT1Q8TDG2 376 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 SLC37A2Q8TED4 501 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 COG1Q8WTW3 980 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.32
USP39-208ENST00000455732 MS4A14Q96JA4 679 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 ZNF514Q96K75 400 aaPredicted RBP17.08■□□□□ 0.32
USP39-208ENST00000455732 TTC25Q96NG3 672 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 RANBP9Q96S59 729 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 ASB8Q9H765 288 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 SYNDIG1Q9H7V2 258 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 KLC4Q9NSK0 619 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 PIH1D1Q9NWS0 290 aaKnown RBP17.08■□□□□ 0.32
USP39-208ENST00000455732 SLC23A2Q9UGH3 650 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 RIMKLBQ9ULI2 386 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 PYCARDQ9ULZ3 195 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 PCDHGA8Q9Y5G5 932 aa17.08■□□□□ 0.32
USP39-208ENST00000455732 TRBV5-4A0A0C4DH59 114 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 KIR2DS5A0A0G2JLQ3 304 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 A0A0G2JNG1 304 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 OR5K4A6NMS3 321 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 RHPN2P1A8MT19 583 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 KIR2DS3K7RE56 304 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 ZW10O43264 779 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 KCNJ13O60928 360 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 GAS8O95995 478 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 ERVPABLB-1P60509 514 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 DMPKQ09013 629 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 CCDC173Q0VFZ6 552 aa17.07■□□□□ 0.32
USP39-208ENST00000455732 SEPT6Q14141 434 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms