RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 LZTS1Q9Y250 596 aa11.86□□□□□ -0.51
SMPD4-213ENST00000454468 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
SMPD4-213ENST00000454468 LOC285095A0A1B0GVY8 99 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 KDELR3O43731 214 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 FKTNO75072 461 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ALDOCP09972 364 aaKnown RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 TCTN1Q2MV58 587 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 AARS2Q5JTZ9 985 aaKnown RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 FAM91A1Q658Y4 838 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 TSPAN33Q86UF1 283 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ANKRD46Q86W74 232 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 FIBCD1Q8N539 461 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 MAGEE2Q8TD90 523 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ING5Q8WYH8 240 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 SOX17Q9H6I2 414 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 HECAQ9UBI9 543 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 IKZF3Q9UKT9 509 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 GSTT1P30711 240 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 HTR6P50406 440 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 TLR1Q15399 786 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 AP5B1Q2VPB7 878 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 PIGGQ5H8A4 983 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 PGM2L1Q6PCE3 622 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ARHGAP22Q7Z5H3 698 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 KBTBD6Q86V97 674 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 BBS7Q8IWZ6 715 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 CLEC4FQ8N1N0 589 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 FAM110BQ8TC76 370 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ISL2Q96A47 359 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 CDK5RAP1Q96SZ6 601 aaKnown RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 FEM1AQ9BSK4 669 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 MTG2Q9H4K7 406 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 SLAMF8Q9P0V8 285 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ILVBLA1L0T0 632 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 TARM1B6A8C7 271 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ALOX15P16050 662 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ITPKAP23677 461 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 PRDX6P30041 224 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 DEFB103AP81534 67 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ADGRE1Q14246 886 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 TCEA2Q15560 299 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 SLC2A7Q6PXP3 512 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 BEND5Q7L4P6 421 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 SYVN1Q86TM6 617 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 UBXN10Q96LJ8 280 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 SPATA16Q9BXB7 569 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ARNT2Q9HBZ2 717 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 MRM3Q9HC36 420 aaKnown RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 MRPL40Q9NQ50 206 aaKnown RBP11.85□□□□□ -0.51
SMPD4-213ENST00000454468 PCDHGB4Q9UN71 923 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 USP22Q9UPT9 525 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 VPS9D1Q9Y2B5 631 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ZNF711Q9Y462 761 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 ASB1Q9Y576 335 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 PCDHGB5Q9Y5G0 923 aa11.85□□□□□ -0.51
SMPD4-213ENST00000454468 OR2AG2A6NM03 316 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 FBP2O00757 339 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 SLC22A3O75751 556 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CXCL14O95715 111 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 HIST1H2AGP0C0S8 130 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-213ENST00000454468 HIST1H2ADP20671 130 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 FDXRP22570 491 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 PAX3P23760 479 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 NEK2P51955 445 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CDH15P55291 814 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 ARF5P84085 180 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CHRNA6Q15825 494 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CRY1Q16526 586 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 LHX8Q68G74 356 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 OFCC1Q8IZS5 231 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 LILRA2Q8N149 483 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 SORCS1Q8WY21 1168 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 HIST1H2AHQ96KK5 128 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 HIST1H2AJQ99878 128 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 H2AFJQ9BTM1 129 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 TRMOQ9BU70 441 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 ZDHHC4Q9NPG8 344 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-213ENST00000454468 OPTCQ9UBM4 332 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 LRRC37A2A6NM11 1700 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 MROH6A6NGR9 719 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 DRGXA6NNA5 263 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 PFDN1O60925 122 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 PAPSS2O95340 614 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-213ENST00000454468 FAM58BPP0C7Q3 252 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CSF2RAP15509 400 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CAPN3P20807 821 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 HALP42357 657 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 POLD2P49005 469 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 PLCL1Q15111 1095 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 TGFBIQ15582 683 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 PLPP4Q5VZY2 271 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 ZFP1Q6P2D0 407 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 CBR4Q8N4T8 237 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 HJURPQ8NCD3 748 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-213ENST00000454468 MED8Q96G25 268 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 TSSK3Q96PN8 268 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 BBS2Q9BXC9 721 aa11.84□□□□□ -0.51
SMPD4-213ENST00000454468 ADNPQ9H2P0 1102 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms