RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ADGRG1Q9Y653 693 aa12.72□□□□□ -0.37
CHD3-206ENST00000452447 A8MU76 341 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 STMND1H3BQB6 276 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 VCLP18206 1134 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 HLA-DPA1P20036 260 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 CTNNA1P35221 906 aaKnown RBP12.71□□□□□ -0.37
CHD3-206ENST00000452447 CHRNA4P43681 627 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 GTF2H3Q13889 308 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 NOMO1Q15155 1222 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 SLC1A5Q15758 541 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 ATP13A5Q4VNC0 1218 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 ITPRIPL1Q6GPH6 555 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 PCSK4Q6UW60 755 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 GLT6D1Q7Z4J2 308 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 ZSCAN1Q8NBB4 408 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 ART4Q93070 314 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 ASPSCR1Q9BZE9 553 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 EPB41L1Q9H4G0 881 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 IL26Q9NPH9 171 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 SLC39A1Q9NY26 324 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 DNAJC16Q9Y2G8 782 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 PCDHGA3Q9Y5H0 932 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 PCDHA3Q9Y5H8 950 aa12.71□□□□□ -0.37
CHD3-206ENST00000452447 CCDC66A2RUB6 948 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 EFCAB7A8K855 629 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 PDZK1P1A8MUH7 402 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 B4E171 279 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.7□□□□□ -0.38
CHD3-206ENST00000452447 EFSO43281 561 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 C1QL1O75973 258 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 ANXA9O76027 345 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 VIPP01282 170 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 ZNF7P17097 686 aaPredicted RBP12.7□□□□□ -0.38
CHD3-206ENST00000452447 RBL1P28749 1068 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 SPAM1P38567 509 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 TSPAN7P41732 249 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 RAB15P59190 212 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 TMEM115Q12893 351 aaPredicted RBP12.7□□□□□ -0.38
CHD3-206ENST00000452447 SEPT7Q16181 437 aaKnown RBP12.7□□□□□ -0.38
CHD3-206ENST00000452447 DCAF12Q5T6F0 453 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 DTX1Q86Y01 620 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 TRAPPC5Q8IUR0 188 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 ACTL9Q8TC94 416 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 BRSK1Q8TDC3 778 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 TTC9Q92623 222 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 SGF29Q96ES7 293 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 TIMM29Q9BSF4 260 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 OSBPL8Q9BZF1 889 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 RBSNQ9H1K0 784 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 PDP2Q9P2J9 529 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 SLC23A2Q9UGH3 650 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 EFR3BQ9Y2G0 817 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 PKP3Q9Y446 797 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 DUSP10Q9Y6W6 482 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 BOD1L1Q8NFC6 3051 aa12.7□□□□□ -0.38
CHD3-206ENST00000452447 GLYATL1P3A0A0U1RQE8 302 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 LILRA5A6NI73 299 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 PPFIA2O75334 1257 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 STK10O94804 968 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 XRCC1P18887 633 aaPredicted RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 IDSP22304 550 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 GEMP55040 296 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 RWDD2BP57060 319 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 UBE2IP63279 158 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 OTUD4Q01804 1114 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 KHDC1Q4VXA5 237 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 VASH2Q86V25 355 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 PLXDC1Q8IUK5 500 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 TTC30BQ8N4P2 665 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 DTX3LQ8TDB6 740 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 JPH3Q8WXH2 748 aaPredicted RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 DDA1Q9BW61 102 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 TBC1D10AQ9BXI6 508 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 ZCCHC2Q9C0B9 1178 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 GBA3Q9H227 469 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 C10orf88Q9H8K7 445 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 OCIAD1Q9NX40 245 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 IL17CQ9P0M4 197 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 KLHL3Q9UH77 587 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 B3GALT1Q9Y5Z6 326 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 TLN1Q9Y490 2541 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 C2orf81A6NN90 581 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 BTNL10A8MVZ5 291 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 STX7O15400 261 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 BUD23O43709 281 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 TJP3O95049 919 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 PTMAP06454 111 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 RBP3P10745 1247 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 FECHP22830 423 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 RPL10P27635 214 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 EIF3EP60228 445 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 SRSF6Q13247 344 aaKnown RBP12.69□□□□□ -0.38
CHD3-206ENST00000452447 LY6DQ14210 128 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
CHD3-206ENST00000452447 LDLRAP1Q5SW96 308 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms