RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 RCBTB1Q8NDN9 531 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 ANKRD7Q92527 254 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 MAGOHBQ96A72 148 aaKnown RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 CCDC74BQ96LY2 380 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 RHOXF2Q9BQY4 288 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 LRRC1Q9BTT6 524 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 ZSCAN5AQ9BUG6 496 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 PARD6BQ9BYG5 372 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 GLOD4Q9HC38 313 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 KLHL8Q9P2G9 620 aaPredicted RBP21.41■■□□□ 1.02
C9orf3-208ENST00000451893 ZNF711Q9Y462 761 aa21.41■■□□□ 1.02
C9orf3-208ENST00000451893 IGSF10Q6WRI0 2623 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 PRAMEF33A0A0G2JMD5 474 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 FADS2P1A8MWK0 482 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 HGSO14964 777 aaPredicted RBP21.4■■□□□ 1.02
C9orf3-208ENST00000451893 PPM1DO15297 605 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 MTSS1O43312 755 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 PRAMEF10O60809 474 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 MAPK9P45984 424 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 GPLD1P80108 840 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 HHEXQ03014 270 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 TEX44Q53QW1 395 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 DRICH1Q6PGQ1 229 aaPredicted RBP21.4■■□□□ 1.02
C9orf3-208ENST00000451893 SLC9B2Q86UD5 537 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 ZNF761Q86XN6 746 aaPredicted RBP21.4■■□□□ 1.02
C9orf3-208ENST00000451893 KLHL7Q8IXQ5 586 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 EIF1ADQ8N9N8 165 aaKnown RBP21.4■■□□□ 1.02
C9orf3-208ENST00000451893 ZSCAN1Q8NBB4 408 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 SLC37A2Q8TED4 501 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 SH3KBP1Q96B97 665 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 OLFM3Q96PB7 478 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 FERMT1Q9BQL6 677 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 HERPUD2Q9BSE4 406 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 MAGEE1Q9HCI5 957 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 UBP1Q9NZI7 540 aa21.4■■□□□ 1.02
C9orf3-208ENST00000451893 OAS3Q9Y6K5 1087 aaKnown RBP21.4■■□□□ 1.02
C9orf3-208ENST00000451893 K7ENP7 123 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 GRID2O43424 1007 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 DNAJC6O75061 913 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 NDST3O95803 873 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 MT-CYBP00156 380 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-208ENST00000451893 NFATC2Q13469 925 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 TRA2AQ13595 282 aaKnown RBP eCLIP21.39■■□□□ 1.01
C9orf3-208ENST00000451893 NR1D2Q14995 579 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 C16orf72Q14CZ0 275 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 INSCQ1MX18 579 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 SNAP47Q5SQN1 464 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 FAM182AQ5T1J6 154 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 INO80CQ6PI98 192 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-208ENST00000451893 SYDE1Q6ZW31 735 aaPredicted RBP21.39■■□□□ 1.01
C9orf3-208ENST00000451893 BBS12Q6ZW61 710 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 TMPRSS9Q7Z410 1059 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 ZC3H18Q86VM9 953 aaKnown RBP21.39■■□□□ 1.01
C9orf3-208ENST00000451893 FAM129CQ86XR2 697 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 IFT20Q8IY31 132 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 OR4D9Q8NGE8 314 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 SPATA22Q8NHS9 363 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 GDAP1Q8TB36 358 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 GRK7Q8WTQ7 553 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.39■■□□□ 1.017e-8■■■■■ 59.4
C9orf3-208ENST00000451893 SLCO2A1Q92959 643 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 HAUS1Q96CS2 278 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 OR2AG1Q9H205 316 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 ARFGAP3Q9NP61 516 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 ST14Q9Y5Y6 855 aa21.39■■□□□ 1.01
C9orf3-208ENST00000451893 IGHV1OR21-1A0A087WYE8 117 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 IGHV5-10-1A0A0J9YXX1 117 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 ERLIN1O75477 346 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 MPSTP25325 297 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 PTPN3P26045 913 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 CD82P27701 267 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 CD1CP29017 333 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 COILP38432 576 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-208ENST00000451893 ETV5P41161 510 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 CFHR1Q03591 330 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 GTF2H3Q13889 308 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 SLC14A2Q15849 920 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 CRTC3Q6UUV7 619 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 TRIM48Q8IWZ4 208 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 TRAM1L1Q8N609 369 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 AVL9Q8NBF6 648 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 AGBL5Q8NDL9 886 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 TTC25Q96NG3 672 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 HEMGNQ9BXL5 484 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-208ENST00000451893 DDX47Q9H0S4 455 aaKnown RBP21.38■■□□□ 1.01
C9orf3-208ENST00000451893 RAB17Q9H0T7 212 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 SAE1Q9UBE0 346 aaPredicted RBP21.38■■□□□ 1.01
C9orf3-208ENST00000451893 FAM153AQ9UHL3 310 aa21.38■■□□□ 1.01
C9orf3-208ENST00000451893 DRG1Q9Y295 367 aaKnown RBP21.38■■□□□ 1.01
C9orf3-208ENST00000451893 CCDC151A5D8V7 595 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 NUAK1O60285 661 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 TNFRSF8P28908 595 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 FASLGP48023 281 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 ATP1A2P50993 1020 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 LIMK2P53671 638 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 DCDC1P59894 354 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 DR1Q01658 176 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 TGIF1Q15583 401 aa21.37■■□□□ 1.01
C9orf3-208ENST00000451893 PLA2G4EQ3MJ16 856 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms