RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 C9orf172C9J069 976 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 PGLSO95336 258 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 WISP1O95388 367 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 GAS8O95995 478 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 MT-CYBP00156 380 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 FUCA1P04066 466 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 PYGLP06737 847 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 ETV5P41161 510 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 ETV3P41162 512 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 CD86P42081 329 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 GNPDA1P46926 289 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 MAZP56270 477 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 GPS1Q13098 491 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 PTK6Q13882 451 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 SPARCL1Q14515 664 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 TRADDQ15628 312 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 P3H1Q32P28 736 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 AMZ1Q400G9 498 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 TEX35Q5T0J7 233 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 DENND2CQ68D51 928 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 RAET1GQ6H3X3 334 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 C8orf74Q6P047 294 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 Q6ZVL8 140 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 TMPRSS9Q7Z410 1059 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 ZFAND4Q86XD8 727 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 GRK7Q8WTQ7 553 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 SCARF2Q96GP6 870 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 TAAR9Q96RI9 348 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 VAT1Q99536 393 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 FERMT1Q9BQL6 677 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 POLR1EQ9GZS1 481 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 RDH14Q9HBH5 336 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 ETNK1Q9HBU6 452 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 ASIC3Q9UHC3 531 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 TRHDEQ9UKU6 1024 aa13.63□□□□□ -0.23
PDLIM2-213ENST00000448520 GOLGA6CA6NDK9 693 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 GOLGA6BA6NDN3 693 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 STMND1H3BQB6 276 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 PMPCBO75439 489 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 GOLGA6DP0CG33 693 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 CES1P23141 567 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 AK4P27144 223 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 CD1CP29017 333 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 ADCY8P40145 1251 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 GPR1P46091 355 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 LIMK2P53671 638 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 CTBSQ01459 385 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 TRAF2Q12933 501 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 NFATC3Q12968 1075 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 DHX34Q14147 1143 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 C16orf72Q14CZ0 275 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 PCSK7Q16549 785 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 ALG1LQ6GMV1 187 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 ITPRIPL1Q6GPH6 555 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 SLC30A9Q6PML9 568 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 ZNF574Q6ZN55 896 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 KDELC2Q7Z4H8 507 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 HSD11B1LQ7Z5J1 315 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 TECPR1Q7Z6L1 1165 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 RAVER1Q8IY67 606 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 OR4D9Q8NGE8 314 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 EXTL1Q92935 676 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 IMP4Q96G21 291 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 SMIM14Q96QK8 99 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 FCRL5Q96RD9 977 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 CDH19Q9H159 772 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 SLC25A51Q9H1U9 297 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 RAB6BQ9NRW1 208 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 STARD5Q9NSY2 213 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 HAUS2Q9NVX0 235 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 GOLGA6AQ9NYA3 693 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 FOXJ2Q9P0K8 574 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 PAK5Q9P286 719 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 PCDHGA4Q9Y5G9 962 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 PCDHGA3Q9Y5H0 932 aa13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 V9GYY5 206 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-213ENST00000448520 MYO18BQ8IUG5 2567 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 IGHV5-10-1A0A0J9YXX1 117 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 TCRBV7S3A2A0A539 114 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 ESYT3A0FGR9 886 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 FAM187AA6NFU0 413 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 NPIPB15A6NHN6 443 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 AGRPO00253 132 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 SLU7O95391 586 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 RHOXF2BP0C7M4 288 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 ZNF30P17039 623 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 LHCGRP22888 699 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 IVDP26440 423 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 CSTF2P33240 577 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 RPL21P46778 160 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 CSRP3P50461 194 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 ATP1A2P50993 1020 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 GPLD1P80108 840 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 BASP1P80723 227 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 PARP6Q2NL67 630 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 ANKRD22Q5VYY1 191 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms