RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 FICDQ9BVA6 458 aa17.46■□□□□ 0.39
DDX56-207ENST00000448192 GBA3Q9H227 469 aa17.46■□□□□ 0.39
DDX56-207ENST00000448192 IL26Q9NPH9 171 aa17.46■□□□□ 0.39
DDX56-207ENST00000448192 CPNE7Q9UBL6 633 aa17.46■□□□□ 0.39
DDX56-207ENST00000448192 ACSL6Q9UKU0 697 aa17.46■□□□□ 0.39
DDX56-207ENST00000448192 PKP3Q9Y446 797 aa17.46■□□□□ 0.39
DDX56-207ENST00000448192 A8MU76 341 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 PDZK1P1A8MUH7 402 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 KCNN4O15554 427 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 ANXA9O76027 345 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 STK10O94804 968 aaKnown RBP17.45■□□□□ 0.38
DDX56-207ENST00000448192 AGTP01019 485 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 PTMAP06454 111 aaKnown RBP17.45■□□□□ 0.38
DDX56-207ENST00000448192 RBP3P10745 1247 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 THRAP10827 490 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 LIPCP11150 499 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 PYGMP11217 842 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 PTPN7P35236 360 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 SPAM1P38567 509 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 CLCNKAP51800 687 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 TMEM115Q12893 351 aaPredicted RBP17.45■□□□□ 0.38
DDX56-207ENST00000448192 GTF2H3Q13889 308 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 CHRNA6Q15825 494 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 SEPT7Q16181 437 aaKnown RBP17.45■□□□□ 0.38
DDX56-207ENST00000448192 TAF1BQ53T94 588 aaPredicted RBP17.45■□□□□ 0.38
DDX56-207ENST00000448192 ZDHHC20Q5W0Z9 365 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 FAM151BQ6UXP7 276 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 TRAPPC5Q8IUR0 188 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 LRRC57Q8N9N7 239 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 SPC24Q8NBT2 197 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 AGBL5Q8NDL9 886 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 ALG3Q92685 438 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 TTC25Q96NG3 672 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 IL17CQ9P0M4 197 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 AMFRQ9UKV5 643 aa17.45■□□□□ 0.38
DDX56-207ENST00000448192 GLYATL1P3A0A0U1RQE8 302 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 K7ENP7 123 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A9O60656 530 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 TJP3O95049 919 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 FGF3P11487 239 aaPredicted RBP17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A6P19224 532 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A1P22309 533 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A4P22310 534 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A3P35503 534 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 RHDQ02161 417 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 PRPSAP1Q14558 356 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 ANKRD20A2Q5SQ80 823 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 ANKRD20A1Q5TYW2 823 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 ANKRD20A3Q5VUR7 823 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 INO80CQ6PI98 192 aaPredicted RBP17.44■□□□□ 0.38
DDX56-207ENST00000448192 PEX26Q7Z412 305 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 FAM129CQ86XR2 697 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 ZNF547Q8IVP9 402 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 TRIM48Q8IWZ4 208 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 AVL9Q8NBF6 648 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 CCDC112Q8NEF3 446 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 TAAR9Q96RI9 348 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 APOL2Q9BQE5 337 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 GORASP1Q9BQQ3 440 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 TIMM29Q9BSF4 260 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 DESI2Q9BSY9 194 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 TBC1D10AQ9BXI6 508 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A7Q9HAW7 530 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A10Q9HAW8 530 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 UGT1A8Q9HAW9 530 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.44■□□□□ 0.38
DDX56-207ENST00000448192 SCHIP1Q9P0W5 487 aaPredicted RBP17.44■□□□□ 0.38
DDX56-207ENST00000448192 TRIM10Q9UDY6 481 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 PCDHB11Q9Y5F2 797 aa17.44■□□□□ 0.38
DDX56-207ENST00000448192 ZNF106Q9H2Y7 1883 aaKnown RBP17.44■□□□□ 0.38
DDX56-207ENST00000448192 ERVH48-1M5A8F1 160 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 TK2O00142 265 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 STX7O15400 261 aaKnown RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 GPR39O43194 453 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 KALRNO60229 2985 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 VIPP01282 170 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 RPL10P27635 214 aaKnown RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 PSMB4P28070 264 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 EPHA4P54764 986 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 KIF5AQ12840 1032 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 SRSF6Q13247 344 aaKnown RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 PTPRCAPQ14761 206 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 MANEAQ5SRI9 462 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 KIAA1614Q5VZ46 1190 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 WDR74Q6RFH5 385 aaPredicted RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 TMEM139Q8IV31 216 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 LSM14AQ8ND56 463 aaKnown RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 CCDC110Q8TBZ0 833 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 BRSK1Q8TDC3 778 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 SNRNP27Q8WVK2 155 aaKnown RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 ART4Q93070 314 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 PMEPA1Q969W9 287 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 OCIAD1Q9NX40 245 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 SLC39A1Q9NY26 324 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 KLHL3Q9UH77 587 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 PACSIN2Q9UNF0 486 aaPredicted RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 AAR2Q9Y312 384 aaKnown RBP17.43■□□□□ 0.38
DDX56-207ENST00000448192 SDK2Q58EX2 2172 aa17.43■□□□□ 0.38
DDX56-207ENST00000448192 A0A0U1RQJ8 604 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms