RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 PCYT1BQ9Y5K3 369 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-207ENST00000447641 U3KQA8 63 aa13.98□□□□□ -0.17
SREBF1-207ENST00000447641 V9GYY5 206 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-207ENST00000447641 FFAR2O15552 330 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 NUAK1O60285 661 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 SRP72O76094 671 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 LDOC1O95751 146 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 CTSEP14091 401 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 ADRA1DP25100 572 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 ADCY8P40145 1251 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 NPY2RP49146 381 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 VPS41P49754 854 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 DRG2P55039 364 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 CAV1Q03135 178 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 NFATC2Q13469 925 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 PTK6Q13882 451 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 ANKRD22Q5VYY1 191 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 ARMC3Q5W041 872 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 ZCCHC8Q6NZY4 707 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 OGFOD3Q6PK18 319 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 PHYKPLQ8IUZ5 450 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 MCUQ8NE86 351 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 DDHD1Q8NEL9 900 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 CCL4L1Q8NHW4 92 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 HNRNPLLQ8WVV9 542 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 PEX13Q92968 403 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 CDKN2AIPNLQ96HQ2 116 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 DNAJC1Q96KC8 554 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 PKNOX2Q96KN3 472 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 CNDP2Q96KP4 475 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 PARD6BQ9BYG5 372 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 CARS2Q9HA77 564 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 FTSJ1Q9UET6 329 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 MGAQ8IWI9 3026 aa13.97□□□□□ -0.17
SREBF1-207ENST00000447641 URB1O60287 2271 aaKnown RBP13.97□□□□□ -0.17
SREBF1-207ENST00000447641 TRBV5-4A0A0C4DH59 114 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 HEATR9A2RTY3 570 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 GPR39O43194 453 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 VEGFDO43915 354 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 PRAMEF1O95521 474 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ANXA6P08133 673 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ALPPL2P10696 532 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 CKMT1AP12532 417 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ZNF8P17098 575 aaPredicted RBP13.96□□□□□ -0.17
SREBF1-207ENST00000447641 CKMT2P17540 419 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ACP1P24666 158 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 GNPDA1P46926 289 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 GUCY2DQ02846 1103 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 CALCOCO2Q13137 446 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 SKIDA1Q1XH10 827 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 DEFB133Q30KQ1 61 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 CCDC38Q502W7 563 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 LDLRAP1Q5SW96 308 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ZNF648Q5T619 568 aaPredicted RBP13.96□□□□□ -0.17
SREBF1-207ENST00000447641 TSTD2Q5T7W7 516 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 DOK6Q6PKX4 331 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 NLRP9Q7RTR0 991 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 CAND1Q86VP6 1230 aaKnown RBP13.96□□□□□ -0.17
SREBF1-207ENST00000447641 GKN2Q86XP6 184 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 OR13J1Q8NGT2 312 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 SGSM3Q96HU1 749 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 APOLD1Q96LR9 279 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ZNF778Q96MU6 729 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 OR2M4Q96R27 311 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 OR2AG1Q9H205 316 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ACBD3Q9H3P7 528 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ANKZF1Q9H8Y5 726 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 TCAF1Q9Y4C2 921 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 FLNBO75369 2602 aaKnown RBP13.96□□□□□ -0.17
SREBF1-207ENST00000447641 ASXL3Q9C0F0 2248 aa13.96□□□□□ -0.17
SREBF1-207ENST00000447641 PRR19A6NJB7 356 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 SMAPO00193 183 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 CCL22O00626 93 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 RAD51CO43502 376 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 TMEM63AO94886 807 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 ASMTLO95671 621 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 MLNP12872 115 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 MAGEA3P43357 314 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 ARSDP51689 593 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 TMPRSS15P98073 1019 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 CTBSQ01459 385 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-207ENST00000447641 CAMK2BQ13554 666 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 LRP8Q14114 963 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 SEPT6Q14141 434 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 GPR33Q49SQ1 333 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 PCID2Q5JVF3 399 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 GPRC6AQ5T6X5 926 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 RNASEH2BQ5TBB1 312 aaKnown RBP13.95□□□□□ -0.18
SREBF1-207ENST00000447641 EMBQ6PCB8 327 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 TMPRSS7Q7RTY8 843 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 SNX20Q7Z614 316 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 PCGF5Q86SE9 256 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 C17orf82Q86X59 251 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-207ENST00000447641 JAMLQ86YT9 394 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 ZNF547Q8IVP9 402 aa13.95□□□□□ -0.18
SREBF1-207ENST00000447641 LRRN4CLQ8ND94 238 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms