RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PTSQ03393 145 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 TBL3Q12788 808 aaKnown RBP17.27■□□□□ 0.35
SMC6-206ENST00000446852 LCP2Q13094 533 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 GEN1Q17RS7 908 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 SWT1Q5T5J6 900 aaKnown RBP17.27■□□□□ 0.35
SMC6-206ENST00000446852 KANK2Q63ZY3 851 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 USP45Q70EL2 814 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 LARP4Q71RC2 724 aaKnown RBP eCLIP17.27■□□□□ 0.35
SMC6-206ENST00000446852 KIAA0907Q7Z7F0 614 aaPredicted RBP17.27■□□□□ 0.35
SMC6-206ENST00000446852 GPSM1Q86YR5 675 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 MARK1Q9P0L2 795 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 CRLS1Q9UJA2 301 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 GNPTGQ9UJJ9 305 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 C15orf41Q9Y2V0 281 aa17.27■□□□□ 0.35
SMC6-206ENST00000446852 AZIN1O14977 448 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 UBDO15205 165 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 ANKS6Q68DC2 871 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 NXPE1Q8N323 547 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 CYB5D2Q8WUJ1 264 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 STMN2Q93045 179 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 ESAMQ96AP7 390 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 PDLIM5Q96HC4 596 aaKnown RBP17.26■□□□□ 0.35
SMC6-206ENST00000446852 ZNF641Q96N77 438 aaPredicted RBP17.26■□□□□ 0.35
SMC6-206ENST00000446852 PLEKHG4BQ96PX9 1271 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 FBRSL1Q9HCM7 1045 aaKnown RBP17.26■□□□□ 0.35
SMC6-206ENST00000446852 ZDHHC7Q9NXF8 308 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 UTP6Q9NYH9 597 aaKnown RBP17.26■□□□□ 0.35
SMC6-206ENST00000446852 PCTPQ9UKL6 214 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 AGAP14A8MT82 685 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 CA3P07451 260 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 TCF3P15923 654 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 DMC1Q14565 340 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 TGFBIQ15582 683 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 GK5Q6ZS86 529 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 ADGRD2Q7Z7M1 963 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 CFAP61Q8NHU2 1237 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 DTX3LQ8TDB6 740 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 ZNF483Q8TF39 744 aaPredicted RBP17.26■□□□□ 0.35
SMC6-206ENST00000446852 TWIST2Q8WVJ9 160 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 ASIC4Q96FT7 647 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 MRGPRX3Q96LB0 322 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 TUBB1Q9H4B7 451 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 BRD9Q9H8M2 597 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 ERVW-1Q9UQF0 538 aa17.26■□□□□ 0.35
SMC6-206ENST00000446852 MRPS23Q9Y3D9 190 aaKnown RBP17.26■□□□□ 0.35
SMC6-206ENST00000446852 PIP5K1BO14986 540 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 TBX10O75333 385 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 HSPA1AP0DMV8 641 aaKnown RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 HSPA1BP0DMV9 641 aaKnown RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 PRDX3P30048 256 aaKnown RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 WEE1P30291 646 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 GPR33Q49SQ1 333 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 C6orf163Q5TEZ5 329 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 SBSNQ6UWP8 590 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 HPS6Q86YV9 775 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 DSELQ8IZU8 1212 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 ZNF557Q8N988 423 aaPredicted RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 CCDC124Q96CT7 223 aaKnown RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 OTUB2Q96DC9 234 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 KLHL32Q96NJ5 620 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 TTC1Q99614 292 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 CD274Q9NZQ7 290 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 B4GALT6Q9UBX8 382 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 SLC25A14O95258 325 aaPredicted RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 RB1P06400 928 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 C1SP09871 688 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 PTDSS1P48651 473 aaKnown RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 CCNG1P51959 295 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 TXNDC11Q6PKC3 985 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 GDPD4Q6W3E5 623 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 AHI1Q8N157 1196 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 C12orf76Q8N812 135 aaPredicted RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 SNX31Q8N9S9 440 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 KYQ8NBH2 561 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 FRS2Q8WU20 508 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 RSPRY1Q96DX4 576 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 GIMAP2Q9UG22 337 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 EIF2B4Q9UI10 523 aaKnown RBP17.25■□□□□ 0.35
SMC6-206ENST00000446852 ZNF225Q9UK10 706 aa17.25■□□□□ 0.35
SMC6-206ENST00000446852 TTC34A8MYJ7 566 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 WASH3PC4AMC7 463 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 TRIM16O95361 564 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 ALDOCP09972 364 aaKnown RBP17.24■□□□□ 0.35
SMC6-206ENST00000446852 POLR2EP19388 210 aaKnown RBP17.24■□□□□ 0.35
SMC6-206ENST00000446852 MTTPP55157 894 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 SESN3P58005 492 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 PTK2BQ14289 1009 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 SQLEQ14534 574 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 ATP13A5Q4VNC0 1218 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 TCEAL5Q5H9L2 206 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 LYPLAL1Q5VWZ2 237 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 MYLK4Q86YV6 388 aaPredicted RBP17.24■□□□□ 0.35
SMC6-206ENST00000446852 HTATIP2Q9BUP3 242 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 ABCG8Q9H221 673 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 AKTIPQ9H8T0 292 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 WASF2Q9Y6W5 498 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 PLXNA2O75051 1894 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 E2F3O00716 465 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 ZNF197O14709 1029 aa17.24■□□□□ 0.35
SMC6-206ENST00000446852 SNX2O60749 519 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms