RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.77■□□□□ 0.6
PMPCB-204ENST00000444457 C1orf74Q96LT6 269 aa18.77■□□□□ 0.6
PMPCB-204ENST00000444457 HOXD1Q9GZZ0 328 aa18.77■□□□□ 0.6
PMPCB-204ENST00000444457 EML4Q9HC35 981 aaKnown RBP18.77■□□□□ 0.6
PMPCB-204ENST00000444457 FBXO8Q9NRD0 319 aa18.77■□□□□ 0.6
PMPCB-204ENST00000444457 ABI2Q9NYB9 513 aaPredicted RBP18.77■□□□□ 0.6
PMPCB-204ENST00000444457 FNIP2Q9P278 1114 aa18.77■□□□□ 0.6
PMPCB-204ENST00000444457 WARS2Q9UGM6 360 aaKnown RBP18.77■□□□□ 0.6
PMPCB-204ENST00000444457 FXYD1O00168 92 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 ADAMTS4O75173 837 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 NR4A1P22736 598 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 SPATS1Q496A3 300 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 RBM20Q5T481 1227 aaKnown RBP18.76■□□□□ 0.59
PMPCB-204ENST00000444457 MFSD14CQ5VZR4 134 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 LARP4Q71RC2 724 aaKnown RBP eCLIP18.76■□□□□ 0.598e-8■□□□□ 8.9
PMPCB-204ENST00000444457 R3HCC1LQ7Z5L2 792 aaKnown RBP18.76■□□□□ 0.59
PMPCB-204ENST00000444457 SLCO6A1Q86UG4 719 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 CUZD1Q86UP6 607 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 MUL1Q969V5 352 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 TXNDC15Q96J42 360 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 UBXN10Q96LJ8 280 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 ING2Q9H160 280 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 ARNT2Q9HBZ2 717 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 MOV10Q9HCE1 1003 aaKnown RBP18.76■□□□□ 0.59
PMPCB-204ENST00000444457 TLR6Q9Y2C9 796 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 NUAK1O60285 661 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 B4GALT3O60512 393 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 LDLRP01130 860 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 YWHAQP27348 245 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 ATAD3BQ5T9A4 648 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 SDHAF4Q5VUM1 108 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 ZNF280DQ6N043 979 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 TBPL2Q6SJ96 375 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 SLC39A13Q96H72 371 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 MUC13Q9H3R2 512 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 IL1RL2Q9HB29 575 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 ATP13A1Q9HD20 1204 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 NT5MQ9NPB1 228 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 IGSF5Q9NSI5 407 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 NDUFAF1Q9Y375 327 aa18.76■□□□□ 0.59
PMPCB-204ENST00000444457 SLC6A2P23975 617 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 STX1BP61266 288 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 CDC20Q12834 499 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 CSHL1Q14406 222 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 ZNF789Q5FWF6 425 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 UGT3A1Q6NUS8 523 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 CYHR1Q6ZMK1 362 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 UMODL1-AS1Q8N2C9 162 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 IMP4Q96G21 291 aaKnown RBP18.75■□□□□ 0.59
PMPCB-204ENST00000444457 SCML2Q9UQR0 700 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 TLL2Q9Y6L7 1015 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 A0A0J9YYE9 177 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 NEMP2A6NFY4 417 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 PSMD11O00231 422 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 INPP4BO15327 924 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 SEPT4O43236 478 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 DNAJB5O75953 348 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 HTR1AP08908 422 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 ALDOCP09972 364 aaKnown RBP18.75■□□□□ 0.59
PMPCB-204ENST00000444457 BMP4P12644 408 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 RENBPP51606 427 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 NKX3-2P78367 333 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 DMPKQ09013 629 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 CRHR2Q13324 411 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 MSANTD2Q6P1R3 559 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 NEK10Q6ZWH5 1172 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 SLC22A16Q86VW1 577 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 MON1AQ86VX9 555 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 ZNF683Q8IZ20 524 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 CALML6Q8TD86 181 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 SLC22A17Q8WUG5 538 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 SGCDQ92629 289 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 HDAC2Q92769 488 aaKnown RBP18.75■□□□□ 0.59
PMPCB-204ENST00000444457 HMCESQ96FZ2 354 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 CPNE5Q9HCH3 593 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 HPS4Q9NQG7 708 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 PRDM5Q9NQX1 630 aaPredicted RBP18.75■□□□□ 0.59
PMPCB-204ENST00000444457 ANAPC2Q9UJX6 822 aa18.75■□□□□ 0.59
PMPCB-204ENST00000444457 FRMPD3Q5JV73 1810 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 C16orf96A6NNT2 1141 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 J3KR12 359 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 NR5A2O00482 541 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 INPPL1O15357 1258 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 DEAF1O75398 565 aaPredicted RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 NTRK1P04629 796 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 UMPSP11172 480 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 GPR15P49685 360 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 SERPINH1P50454 418 aaKnown RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 GABARAPL2P60520 117 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 MAXP61244 160 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 POLD3Q15054 466 aaPredicted RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 KCNA10Q16322 511 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 EML3Q32P44 896 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 TECRLQ5HYJ1 363 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 THAP5Q7Z6K1 395 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 AKAP14Q86UN6 197 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 ZCCHC7Q8N3Z6 543 aaKnown RBP18.74■□□□□ 0.59
PMPCB-204ENST00000444457 LILRB4Q8NHJ6 448 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 OSCP1Q8WVF1 389 aa18.74■□□□□ 0.59
PMPCB-204ENST00000444457 SLC30A3Q99726 388 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms