RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ACAP2Q15057 778 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 MLF2Q15773 248 aaPredicted RBP9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 TMEM52BQ4KMG9 183 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 EOGTQ5NDL2 527 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 ATG16L1Q676U5 607 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 RAVER1Q8IY67 606 aaKnown RBP9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 CD200R1Q8TD46 325 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 ZNF473Q8WTR7 871 aaKnown RBP9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 SLC6A17Q9H1V8 727 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 SERGEFQ9UGK8 458 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 DUSP12Q9UNI6 340 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 PRSS21Q9Y6M0 314 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 PLXNB3Q9ULL4 1909 aa9.4□□□□□ -0.9
SMPD4P1-203ENST00000443839 FADS2P1A8MWK0 482 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 AP1G1O43747 822 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 RBP1P09455 135 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 GM2AP17900 193 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 ITGB6P18564 788 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 TFEBP19484 476 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 MSH3P20585 1137 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 CD9P21926 228 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 TAS2R38P59533 333 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 IL2P60568 153 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 HABP4Q5JVS0 413 aaKnown RBP9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 GKAP1Q5VSY0 366 aaPredicted RBP9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 RAET1GQ6H3X3 334 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZYG11AQ6WRX3 759 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZNF852Q6ZMS4 543 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 MACC1Q6ZN28 852 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZCCHC23Q6ZST2 131 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 DET1Q7L5Y6 550 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 SPATS2Q86XZ4 545 aaKnown RBP9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 NKAPQ8N5F7 415 aaKnown RBP9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 RAB3IL1Q8TBN0 382 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 GLYATL1Q969I3 302 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 SGF29Q96ES7 293 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 TSSK1BQ9BXA7 367 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 ALG9Q9H6U8 611 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 GALPQ9UBC7 116 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 TMPRSS11EQ9UL52 423 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 CA14Q9ULX7 337 aa9.4□□□□□ -0.91
SMPD4P1-203ENST00000443839 NUMA1Q14980 2115 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 IGLV3-16A0A075B6K0 115 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 PRR23AA6NEV1 266 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 SHISA7A6NL88 538 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 G3V2L1 256 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 KLF11O14901 512 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 INPP4BO15327 924 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZBTB14O43829 449 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 MTX2O75431 263 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 SLC25A14O95258 325 aaPredicted RBP9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 OR56A5P0C7T3 313 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 ACADMP11310 421 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 CD1DP15813 335 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 CLCN7P51798 805 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 B4GALNT1Q00973 533 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 BST1Q10588 318 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 HSF5Q4G112 596 aaPredicted RBP9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 TECRLQ5HYJ1 363 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 LDLRAP1Q5SW96 308 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZNF765Q7L2R6 523 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 OTOAQ7RTW8 1153 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 PHYKPLQ8IUZ5 450 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 ADHFE1Q8IWW8 467 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 CPNE9Q8IYJ1 553 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 TMEM151AQ8N4L1 468 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 DDHD1Q8NEL9 900 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 OR14C36Q8NHC7 312 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 GIMAP7Q8NHV1 300 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 MAFAQ8NHW3 353 aaPredicted RBP9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 BTN2A2Q8WVV5 523 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 LINGO1Q96FE5 620 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 SIPA1Q96FS4 1042 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 VPS35Q96QK1 796 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 PANX3Q96QZ0 392 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 SLC30A3Q99726 388 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 ELAC2Q9BQ52 826 aaKnown RBP9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 DERL2Q9GZP9 239 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 PRDM6Q9NQX0 595 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 MMP17Q9ULZ9 603 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 SCML1Q9UN30 329 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 DHRS7Q9Y394 339 aa9.39□□□□□ -0.91
SMPD4P1-203ENST00000443839 IGLON5A6NGN9 336 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 K7ESM1 405 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 EDF1O60869 148 aaKnown RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 TM7SF2O76062 418 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 SERPINE1P05121 402 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 FGF3P11487 239 aaPredicted RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ATP1B2P14415 290 aaPredicted RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 GRK2P25098 689 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 GPR1P46091 355 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ATP6V0D1P61421 351 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 CREB5Q02930 508 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZBTB16Q05516 673 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 SF3A3Q12874 501 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 STX3Q13277 289 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 TTLL9Q3SXZ7 439 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 KIAA1324Q6UXG2 1013 aaKnown RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ISCA2Q86U28 154 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms