RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SPATS2LQ9NUQ6 558 aaKnown RBP12.17□□□□□ -0.46
USP1-203ENST00000442679 ZDHHC3Q9NYG2 299 aa12.17□□□□□ -0.46
USP1-203ENST00000442679 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
USP1-203ENST00000442679 TAAR2Q9P1P5 351 aa12.17□□□□□ -0.46
USP1-203ENST00000442679 SIRPGQ9P1W8 387 aa12.17□□□□□ -0.46
USP1-203ENST00000442679 GULP1Q9UBP9 304 aa12.17□□□□□ -0.46
USP1-203ENST00000442679 SOX13Q9UN79 622 aa12.17□□□□□ -0.46
USP1-203ENST00000442679 MRFAP1Q9Y605 127 aa12.17□□□□□ -0.46
USP1-203ENST00000442679 TP53BP1Q12888 1972 aaPredicted RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 SPTBN4Q9H254 2564 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 CFAP99D6REC4 459 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 SMAPO00193 183 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 SEC31AO94979 1220 aaKnown RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 CKMT1AP12532 417 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 ACP5P13686 325 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 ZNF7P17097 686 aaPredicted RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 ACRV1P26436 265 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 FOXN2P32314 431 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 RPL21P46778 160 aaKnown RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 RPIAP49247 311 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 DUSP3P51452 185 aaPredicted RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 CTSCP53634 463 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 ITGA8P53708 1063 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 B4GALNT1Q00973 533 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 NR0B2Q15466 257 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 PLA2G4EQ3MJ16 856 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 FASTKD1Q53R41 847 aaKnown RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 CCDC157Q569K6 752 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 DNAJC21Q5F1R6 531 aaKnown RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 FNBP1LQ5T0N5 605 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 LYPLAL1Q5VWZ2 237 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 OGFOD3Q6PK18 319 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 DET1Q7L5Y6 550 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 SLCO6A1Q86UG4 719 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 TRAPPC5Q8IUR0 188 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 ZNF547Q8IVP9 402 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 SLC35F3Q8IY50 421 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 MNS1Q8NEH6 495 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.16□□□□□ -0.46
USP1-203ENST00000442679 MFSD3Q96ES6 412 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 ZNF514Q96K75 400 aaPredicted RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 KLC4Q9NSK0 619 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 EVA1BQ9NVM1 165 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 SLC23A2Q9UGH3 650 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 APOBEC2Q9Y235 224 aaKnown RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 KCNK6Q9Y257 313 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 MAD1L1Q9Y6D9 718 aa12.16□□□□□ -0.46
USP1-203ENST00000442679 ASCC3Q8N3C0 2202 aaKnown RBP12.16□□□□□ -0.46
USP1-203ENST00000442679 LY6G6EA0A0G2JKS1 128 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 FAM237BA0A1B0GVD1 139 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 CPED1A4D0V7 1026 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 OR2AG2A6NM03 316 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 B4DGG1 531 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 NDC80O14777 642 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 CD3EAPO15446 510 aaKnown RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 POP7O75817 140 aaKnown RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 VAPBO95292 243 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 ATP1B2P14415 290 aaPredicted RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 ACP1P24666 158 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 DBN1Q16643 649 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 INSCQ1MX18 579 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 BBS9Q3SYG4 887 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 ANKRD20A4Q4UJ75 823 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 N4BP2L1Q5TBK1 243 aaPredicted RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 AGGF1Q8N302 714 aaeCLIP12.15□□□□□ -0.46
USP1-203ENST00000442679 ARL10Q8N8L6 244 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 PNPLA1Q8N8W4 532 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 KYQ8NBH2 561 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 BBOF1Q8ND07 529 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 ZDHHC1Q8WTX9 485 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 NAT14Q8WUY8 206 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 CCDC97Q96F63 343 aaPredicted RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 SGSM3Q96HU1 749 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 FCRL3Q96P31 734 aaPredicted RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 TTC1Q99614 292 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 TRIM56Q9BRZ2 755 aaKnown RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 TIMM29Q9BSF4 260 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 DPH5Q9H2P9 285 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 CATSPERZQ9NTU4 200 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 TOR4AQ9NXH8 423 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 PADI4Q9UM07 663 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 UTP11Q9Y3A2 253 aaKnown RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 DNMT3AQ9Y6K1 912 aaPredicted RBP12.15□□□□□ -0.46
USP1-203ENST00000442679 U3KQA8 63 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 SCN8AQ9UQD0 1980 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
USP1-203ENST00000442679 IGLV3-16A0A075B6K0 115 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 CTAGE15A4D2H0 777 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 NOBOXO60393 691 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 SNX2O60749 519 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 KCNJ13O60928 360 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 CTAGE8P0CG41 777 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 VCLP18206 1134 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 PAMP19021 973 aa12.14□□□□□ -0.47
USP1-203ENST00000442679 PPARGP37231 505 aaPredicted RBP12.14□□□□□ -0.47
USP1-203ENST00000442679 ACADVLP49748 655 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms