RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 PRAMEF1O95521 474 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 TOP3BO95985 862 aaKnown RBP8.02□□□□□ -1.13
CCDC39-201ENST00000442201 EPHX1P07099 455 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 TIMP2P16035 220 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF30P17039 623 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 BPIP17213 487 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ITGALP20701 1170 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 LHCGRP22888 699 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 VIPR1P32241 457 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PPARGP37231 505 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-201ENST00000442201 SPAM1P38567 509 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PDK4Q16654 411 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 POM121L1PQ3SYA9 428 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 N4BP2L1Q5TBK1 243 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-201ENST00000442201 HECTD2Q5U5R9 776 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PSAPL1Q6NUJ1 521 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 FAM151BQ6UXP7 276 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CERS6Q6ZMG9 384 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CHPFQ8IZ52 775 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PIP4K2CQ8TBX8 421 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 LRRC8CQ8TDW0 803 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 TTC1Q99614 292 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 HGH1Q9BTY7 390 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PCDH12Q9NPG4 1184 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 IL26Q9NPH9 171 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ATAD3AQ9NVI7 634 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PPM1HQ9ULR3 514 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 WDR91A4D1P6 747 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 TCP11X1B4DZS4 312 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 NPC1O15118 1278 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 UBOX5O94941 541 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 IL1BP01584 269 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 SLC35E2BP0CK96 405 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 COL6A2P12110 1019 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 HNRNPLP14866 589 aaKnown RBP eCLIP8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CTHP32929 405 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 TNFRSF4P43489 277 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CDKN1CP49918 316 aaPredicted RBP8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CSRP3P50461 194 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 DMPKQ09013 629 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ZDHHC20Q5W0Z9 365 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ERAP2Q6P179 960 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 C16orf46Q6P387 395 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 Q6ZNX1 250 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CLEC14AQ86T13 490 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CEP97Q8IW35 865 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 NAT14Q8WUY8 206 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 LPGAT1Q92604 370 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PPP1R16AQ96I34 528 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ACOX2Q99424 681 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 CCT7Q99832 543 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 FAM96AQ9H5X1 160 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ASB8Q9H765 288 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 KCNK12Q9HB15 430 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 ZDHHC4Q9NPG8 344 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 TIMMDC1Q9NPL8 285 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 PTTG2Q9NZH5 202 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 LIMD1Q9UGP4 676 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 SARDHQ9UL12 918 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 STON1Q9Y6Q2 735 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 REV3LO60673 3130 aa8.02□□□□□ -1.13
CCDC39-201ENST00000442201 BRWD1Q9NSI6 2320 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 SZT2Q5T011 3432 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 MYLKQ15746 1914 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 C1QTNF3-AMACRE9PGA6 284 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 SPECC1L-ADORA2AF8WAN1 911 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 BOLA2-SMG1P6H3BVE0 249 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PLIN3O60664 434 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PTDSS1P48651 473 aaKnown RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 RAB15P59190 212 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 IRX4P78413 519 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PTSQ03393 145 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 GPR33Q49SQ1 333 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 FAM209AQ5JX71 171 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PARS2Q7L3T8 475 aaKnown RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 SNX20Q7Z614 316 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PLD6Q8N2A8 252 aaKnown RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 FNDC8Q8TC99 324 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 FAM129BQ96TA1 746 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 OLFM1Q99784 485 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 CENPKQ9BS16 269 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PHF7Q9BWX1 381 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 NSRP1Q9H0G5 558 aaKnown RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 DYRK4Q9NR20 520 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PKD2L2Q9NZM6 624 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 TMEM216Q9P0N5 145 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 ZMAT5Q9UDW3 170 aaKnown RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 HCN2Q9UL51 889 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 KIF26AQ9ULI4 1882 aaPredicted RBP8.01□□□□□ -1.13
CCDC39-201ENST00000442201 A0A087X1B8 175 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 TAC1P20366 129 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 ITGB7P26010 798 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 GMPRP36959 345 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 PTGER3P43115 390 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 IRF9Q00978 393 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 NFATC2Q13469 925 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 ITGA9Q13797 1035 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF460Q14592 562 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 IL23RQ5VWK5 629 aa8.01□□□□□ -1.13
CCDC39-201ENST00000442201 ZNF549Q6P9A3 640 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms