RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 MILR1Q7Z6M3 343 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 PSTKQ8IV42 348 aaKnown RBP7.48□□□□□ -1.21
HDAC9-214ENST00000441542 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.48□□□□□ -1.21
HDAC9-214ENST00000441542 TOP1MTQ969P6 601 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 LGALS12Q96DT0 336 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 VPS35Q96QK1 796 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 NAT9Q9BTE0 207 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 C1QTNF1Q9BXJ1 281 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 AMBRA1Q9C0C7 1298 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 NUAK2Q9H093 628 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 RHOJQ9H4E5 214 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 MOV10Q9HCE1 1003 aaKnown RBP7.48□□□□□ -1.21
HDAC9-214ENST00000441542 C12orf4Q9NQ89 552 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 RNF146Q9NTX7 359 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 FAM118AQ9NWS6 357 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 IPPQ9Y573 584 aa7.48□□□□□ -1.21
HDAC9-214ENST00000441542 SBF2Q86WG5 1849 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 CCDC163A0A0D9SF12 145 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 TTC34A8MYJ7 566 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 FXYD1O00168 92 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 FCGR1AP12314 374 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 PTPN2P17706 415 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 S100A5P33763 92 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 EIF2DP41214 584 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 SLC1A2P43004 574 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 MAGEA6P43360 314 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 SERPINH1P50454 418 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 PPP5CP53041 499 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 P2RX3P56373 397 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 UFM1P61960 85 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 SLC6A3Q01959 620 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 SELPLGQ14242 412 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 PFKFB4Q16877 469 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 UGT3A2Q3SY77 523 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 CELF3Q5SZQ8 465 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 GPR158Q5T848 1215 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 DCP2Q8IU60 420 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 RNF139Q8WU17 664 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 PABPC5Q96DU9 382 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 TXNDC15Q96J42 360 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 TBATAQ96M53 351 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 ACOX2Q99424 681 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 THUMPD3Q9BV44 507 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 MMP28Q9H239 520 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 EML4Q9HC35 981 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 TLR9Q9NR96 1032 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 INTS10Q9NVR2 710 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 KCTD5Q9NXV2 234 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 EHD3Q9NZN3 535 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 VPS4AQ9UN37 437 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 C2orf81A6NN90 581 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 M0QX08 132 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 ERVH48-1M5A8F1 160 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 EEF2KO00418 725 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 ZW10O43264 779 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 RBP1P09455 135 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 ATF4P18848 351 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 ST13P50502 369 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 DGKQP52824 942 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 MRPL28Q13084 256 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 SUZ12Q15022 739 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 BCL7AQ4VC05 210 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 BTBD8Q5XKL5 378 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 FAM45BPQ6NSW5 357 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 SYCE2Q6PIF2 218 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 DEFB106AQ8N104 65 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 TCAIMQ8N3R3 496 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 PTGR2Q8N8N7 351 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 GLB1L3Q8NCI6 653 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 FAM45AQ8TCE6 357 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 MUL1Q969V5 352 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 Q96MT0 163 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 ZDHHC15Q96MV8 337 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 GPR22Q99680 433 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 CHCHD6Q9BRQ6 235 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 FICDQ9BVA6 458 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 PORCNQ9H237 461 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 DPEP3Q9H4B8 488 aa7.47□□□□□ -1.21
HDAC9-214ENST00000441542 CCDC177Q9NQR7 707 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 NUFIP1Q9UHK0 495 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 WBP11Q9Y2W2 641 aaKnown RBP7.47□□□□□ -1.21
HDAC9-214ENST00000441542 LOC105371267A0A1B0GV96 52 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 SMIM30A4D0T7 59 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 OR51F1A6NGY5 319 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 FAM72CH0Y354 149 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 H3BUI4 141 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 M0QYT0 321 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 PRMT5O14744 637 aaPredicted RBP7.46□□□□□ -1.21
HDAC9-214ENST00000441542 KMOO15229 486 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 SLC22A2O15244 555 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 CILPO75339 1184 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 IPO13O94829 963 aaKnown RBP7.46□□□□□ -1.21
HDAC9-214ENST00000441542 MLNP12872 115 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 GPX3P22352 226 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 PTPN3P26045 913 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 UQCRC1P31930 480 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 HADHAP40939 763 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 KCNC1P48547 511 aa7.46□□□□□ -1.21
HDAC9-214ENST00000441542 ALDH3A2P51648 485 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms